Streptomyces goshikiensis: PET44_25260
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Entry
PET44_25260 CDS
T09307
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgk
Streptomyces goshikiensis
Pathway
sgk03030
DNA replication
sgk03430
Mismatch repair
sgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PET44_25260
03430 Mismatch repair
PET44_25260
03440 Homologous recombination
PET44_25260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgk03032
]
PET44_25260
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_25260
Enzymes [BR:
sgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PET44_25260
DNA replication proteins [BR:
sgk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PET44_25260
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PET44_25260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WBY22654
LinkDB
All DBs
Position
5705812..5706552
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AA seq
246 aa
AA seq
DB search
MAAWHGGALVGFDLETTGTEPGESRIVTAAVVEVRGGEVRERRGWLADPGIPIPEQASAI
HGISTARAVAEGRPVREVAQEVAAALVEHWRRGAVVVAYNAAFDLTLLSAELARHGLPSL
SDRLGGAPTGPVVDPLTIDRAVDRYRRGKRTLEAVCGVYGVTLDDAHDAGADALAAVQVA
RAIADRHPEVAGLTPADLHDRQGAWHARWARDFQSYLRRQGSPDAVIDTAWPLRGLIPSQ
ARAGGA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtggcacgggggagcactggtcggattcgacctggagacgacggggacggag
ccgggggagtcgcggatcgtgacggccgcggtggtcgaggtgcggggcggcgaggtccgc
gagcggcgcggctggctcgcggacccggggataccgatcccggaacaggcctcggcgatc
cacgggatcagcacggcgcgggccgtcgccgagggccgcccggtgcgggaggtcgcgcag
gaggtggcggccgccctggtggagcactggcggcggggcgcggtggtcgtcgcctacaac
gcggccttcgacctgacgctgctgtcggcggagctggcgcggcacgggctgccgtcgctc
tccgaccggctgggcggcgcgccgacggggccggtggtggacccgctgaccatcgaccgg
gcggtggaccgctaccggcgcgggaagcgcacgctggaggcggtgtgcggggtgtacggg
gtcaccctggacgacgcgcacgatgccggggcggacgcgctggccgccgtccaggtggcc
cgggcgatagccgaccgccatccggaggtggccggcctcaccccggcggacctccacgac
cggcagggcgcctggcacgcccgctgggcccgcgacttccagtcctacctgcgccgccag
ggcagcccggacgcggtgatcgacacggcctggcccctgcgcggcctcataccctcccag
gcccgggccggcggggcctag
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