Streptomyces goshikiensis: PET44_27005
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Entry
PET44_27005 CDS
T09307
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_27005
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PET44_27005
Archaeal homologous recombinant proteins
PET44_27005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
baeRF_family2
Hydrolase
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WBY22964
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Position
6107969..6109138
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AA seq
389 aa
AA seq
DB search
MRILHTSDWHLGRAFHRVNLLGAQAAFVDHLVETVRAHEVDVVLVAGDVYDRAVPPLPAV
ELYDRALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTDPDGCADPVVLADV
HGEVAFYGLPYLEPALVKDRFGAGQVSHEAVLGAAMDRIRADLATRPPGTRSVVLAHAFV
TGGQASDSERDITVGGVEAVPASVFDGVDYAALGHLHGCQTISERVRYSGSPLAYSFSEA
DHRKTMWLIELGARGEIAGADRIDTPVPRALARLRGPLEDLLDDPALAGYEDRWVEATLT
DPVRPEDPMARLAARFPHVLSLAFDPEGREEDSGASYAQRLKGRSDQEIAEDFVAHVRGG
GAPSEAERAVLQGAFDDVRTDATRQETLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatcctgcacacctccgactggcacctcggccgggccttccaccgcgtgaacctg
ctcggcgcccaggccgccttcgtcgaccacctcgtcgagaccgtccgcgcgcacgaggtc
gacgtcgtcctcgtcgccggtgacgtctacgaccgcgccgtccccccgctgcccgccgtc
gagctgtacgaccgggccctgcaccggctcgccgacctcggcgtgcccaccgtgatgatc
tcggggaaccacgactccgcccgtcgcctcggggtcggggccgggctgatcggccgggcc
gggatccacctcaggaccgacccggacggctgcgccgaccccgtggtgctggccgacgta
cacggcgaggtggccttctacgggctgccgtacctggaaccggccctggtcaaggaccgg
ttcggcgccgggcaggtcagccacgaggccgtactgggcgcggccatggaccggatccgg
gccgacctggccacccgcccgcccggcacccgctccgtcgtcctcgcccacgccttcgtc
accggcgggcaggccagcgacagcgagcgcgacatcaccgtcggcggggtcgaggccgtg
cccgcctccgtcttcgacggggtggactacgccgccctcggccacctccacggctgccag
acgatcagcgaacgggtccgctactccggttccccgctcgcctactccttctccgaggcc
gaccaccgcaagactatgtggctgatcgagctcggcgcgcggggcgagatcgccggcgcc
gaccggatcgacacccccgtgccgcgggcgctcgcccggctgcgggggccgctggaggac
ctcctcgacgaccccgcgctcgccgggtacgaggaccgctgggtcgaggccaccctcacc
gaccccgtccggcccgaggaccccatggcccgcctcgccgcccgcttcccgcacgtcctc
agcctcgccttcgaccccgagggccgcgaggaggacagcggagcctcctacgcccagcgc
ctcaagggccgcagcgaccaggagatcgccgaggacttcgtcgcccacgtccggggcggg
ggtgccccgagcgaggccgaacgggcggtgctccagggcgccttcgacgacgtacgcacc
gacgccacgcgccaggagaccctccgatga
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