Streptomyces goshikiensis: PET44_27010
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Entry
PET44_27010 CDS
T09307
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgk03400
]
PET44_27010
DNA repair and recombination proteins [BR:
sgk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PET44_27010
Archaeal homologous recombinant proteins
PET44_27010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
WBY22965
LinkDB
All DBs
Position
6109135..6112149
Genome browser
AA seq
1004 aa
AA seq
DB search
MRLHRLRVTAFGPFAEPQEIDFDALSGAGIFLLHGPTGAGKTSVLDAVCYALYGSVPGSR
QAPGTSLRSDHSAPDTPTEVTLDLTAGGRRLEITRRPEQDRPKKRGTGTTKDKAQSWLRE
RTGEGWEALSRSHQEIGEEIEQLLGMSREQFCQVVLLPQGEFARFLRADEGARGRLLGRL
FDTRRFAAVEALLAERRRAAEAKVRAGDEKVLGTAQRLAQAAGHGADLRDWPMPRHQPGD
PGLAEAVRAWAALARCSARERRTVAEYALAAVEGREAAARRAAEEARELDRLQRRHAETA
RRAALLAEAAPDRDRVRDLLDRARRGALVAPALEMRGAAYSAHLTAAHAETAARAQLPPA
LAEAGTEQLGSVEQRLREELGAVGAAHRAEQRSAEIGRERATLEREARAAEEQHQESAEW
LARWEDTRAELAERVEAAQQAATLGEQLAGKLEPARMHLTAARRRDGLDAEAEVTSGELL
RVREESAAARERWLELKEARLRGIAAELAEALEEGVPCTVCGSQRHPDPARPAPGHVDRA
AEDAAHARFEEAEERRAAVERKLAAVQEARAEAAAAAGEATTAELLELTADLSSRHAAAH
AAAAGLHAARERLARAEREHAARSSDRLDAERRAAARTSRREALDREQASLEAELALVRG
DAPTVAARARILEDRIRMVTGAAHALRRAETTAARLKEADDQLADAAFKAGFDTIDAAAD
AVLPEYERTALQHRSDAWQAEEAMLADRHAETDTAAAAALPPADPQTAQAHADRAAATLR
TAGSAYDAARVRCAELDRLSRQAEQELRAMGPLREEYDRVARLAGLTAGTSADNERKMRL
EAYVLAARLEQVAAAATVRLLRMSGGRYTLVHSDAKASGRGRSGLGLHVVDAWTGSERDT
ATLSGGETFFASLALALGLADVVTDEAGGMRLDTLFIDEGFGSLDDQALDEVLDVLDSLR
ERDRSVGIVSHVADLRTRVQAQLEIVKQRGGSLVRHRTAAALTD
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggctgcgggtcaccgccttcggccccttcgccgagccccaggagatc
gacttcgacgccttgtccggcgccgggatcttcctgctgcacggccccaccggcgcgggc
aagacctccgtgctcgacgccgtctgctacgccctgtacgggtccgtgcccggctcccgc
caggcccccggcacgagcctgcgcagcgatcactccgcccccgacaccccgaccgaggtc
accctcgacctcaccgcgggcggccgccgcctggagatcacccggcgccccgagcaggac
cggcccaagaagcgcggcaccggcacgaccaaggacaaggcgcagagctggctgcgcgag
cgcaccggcgagggctgggaggcgctcagccgctcccaccaggagatcggcgaggagatc
gagcagctgctcggcatgagccgcgagcagttctgccaggtggtgctcctcccgcagggc
gagttcgcgcgcttcctgcgggccgacgagggcgcgcgcggccggctgctcgggcggctc
ttcgacacccgccgcttcgccgccgtcgaggccctgctcgccgagcgccgccgggccgcc
gaggcgaaggtacgggccggggacgagaaggtgctcggcaccgcccagcggctggcccag
gccgccggacacggcgccgacctgcgggactggccgatgccccggcaccagcccggtgac
cccggcctggccgaggcggtccgggcctgggcggcgctcgcccgctgctccgcccgggag
cggcggaccgtcgcggagtacgcgctggccgccgtcgaggggcgcgaggccgccgcccgg
cgcgccgccgaggaggcgcgggagctcgaccgcctgcaacgccggcacgccgagacggcc
cgccgggccgccctgctcgccgaagccgcgcccgaccgggaccgggtgcgcgacctgctc
gaccgggcccggcgcggggccctggtcgcccccgccctggagatgcgcggagccgcctat
tccgcgcacctcaccgccgcccacgctgagacggccgcccgggcgcagctcccgcccgcc
ctcgccgaggccggaaccgagcagctcggctccgtcgagcagcggctgcgggaggaactc
ggagcggtcggcgccgcccaccgcgccgagcagcgcagcgccgagatcggccgcgagcgc
gccaccctggagcgggaggcccgcgccgcggaggagcagcaccaggagtccgccgagtgg
ctcgcccgctgggaggacacccgggccgagctggccgagcgggtggaggccgcccagcag
gccgcgaccctgggcgagcagctcgccgggaagctggaacccgcccggatgcacctcacg
gccgcccggcggcgggacggactcgacgccgaggcggaggtgacctccggcgagctgctg
cgcgtacgggaggagtccgccgccgcccgggaacgctggctggagctgaaggaggcccgg
ctgcgcgggatcgccgccgagctggccgaggcgctggaggagggcgtgccctgcaccgtg
tgcggttcgcagcggcacccggatccggcgcggcccgcccccgggcacgtggaccgggcc
gccgaggacgccgcccacgcccggttcgaggaggccgaggagcgcagggccgccgtcgag
cggaaactcgccgccgtccaggaggcccgcgccgaggccgcggccgccgcgggcgaggcc
accaccgccgaactgctcgaactcaccgccgacctcagctcccggcacgccgccgcccac
gcggcggccgccggactgcacgccgcccgggagcggctcgcccgcgccgagcgggagcac
gccgcgcgcagctccgaccggctcgacgccgagcgccgggccgccgcccggacctcgcgg
cgggaggccctggaccgcgagcaggcctcgctggaggccgagctggccctcgtccggggg
gacgcgcccaccgtcgccgcccgcgcccggatcctggaggaccggatccgcatggtcacc
ggcgccgcccacgcgctgcgccgggccgagaccaccgccgcccgcctgaaggaggctgac
gaccagctggccgacgccgcgttcaaggcaggcttcgacaccatcgacgccgccgccgac
gccgtgctccccgagtacgaacgcaccgcgctccagcaccggtcggacgcctggcaggcc
gaggaggcgatgctcgccgaccggcacgccgagaccgacaccgcggcggccgccgccctg
cccccggccgacccgcagaccgcccaggcccacgccgaccgggccgccgcgacactccgt
acggccggctcggcgtacgacgcggcccgggtccgctgcgccgagctcgaccggctctcc
cggcaggccgagcaggaactgcgcgcgatggggccgctgcgcgaggagtacgaccgggtg
gcccggctcgccggactcaccgcgggcacctccgccgacaacgagcgcaagatgcggctg
gaggcgtacgtcctggccgcccggctggagcaggtcgccgccgcggcgacggtacggctg
ctgcgcatgtccggcggccgctacaccctggtccactcggacgcgaaagcgagcggacgc
ggccgttcgggtctcggcctgcacgtggtggacgcctggaccggcagcgagcgggacacc
gccaccctctcgggcggcgagaccttcttcgcctcgctcgccctggccctgggcctcgcg
gacgtggtcaccgacgaggcgggcgggatgcggctcgacaccctgttcatcgacgagggc
ttcggcagcctcgacgaccaggcgctggacgaggtgctcgacgtactggactcgctgcgc
gaacgggaccgcagcgtcggcatcgtgagtcacgtcgcagatctgcgcacccgggtgcag
gcacagctggagatcgtcaagcagcgcggcggttccctggtgcgccaccgcaccgcggcc
gccctcacggactga
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