Streptomyces goshikiensis: PET44_30650
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Entry
PET44_30650 CDS
T09307
Name
(GenBank) HAMP domain-containing protein
Organism
sgk
Streptomyces goshikiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
DUF948
Laminin_II
GAF_3
RNase_Y_N
OmpH
ATG14
Motif
Other DBs
NCBI-ProteinID:
WBY23638
LinkDB
All DBs
Position
6957131..6961150
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AA seq
1339 aa
AA seq
DB search
MAERAGTDSLSGAPVVPREGGIGEPELRLLLAGLTAVRDGDFRTRLPDAADGLLGEIATV
FNGMVNQLSLFTSEVTRVAREVGTEGTLGGQADVPGVGGAWLDLTDSVNFMAGNLTAQVR
SIAQVATAVAKGDLSQKINVTARGEILELKETINTMVDQLSGFAGEVTRVAREVGTEGRL
GGQADVKGVSGTWKDLTESVNVMADNLTAQVRSIAEVTTAVAQGDLTQKIRVDARGEILE
LKETINTMVDQLSAFADEVTRVSREVGTEGNLGGQATVRGVSGTWKDLTDNVNVMASNLT
GQVRSIAQVATAVARGDLSQKIVVEAKGEVAALAGVINTMVDTLSAFADEVTRVAREVGT
EGRLGGQARVPNVAGTWKDLTDNVNSMANNLTGQVRNIALVTTAVANGDLSKKIDVDARG
EILELKTTINTMVDQLSSFAAEVTRVAREVGSEGRLGGQAEVEGVSGTWKRLTENVNELA
GNLTRQVRAIAEVASAVAEGDLTLSITVDASGEVAELKDNINSMVGSLRESTRANQEQDW
LKSNLARISGLMQGHRDLAAVAELVMDELTPLVAAQYGAFYLAEDGPAGTVLTLVGSYGR
PAGADEGTGFALGESLVGQAARSHRIIATDQVPGGYVISSGLGHTTPGSLIILPIVVDDQ
VLGVIELASFTAFTPVHRDFLGQLMETIGVNVNTIVANARTDELLGESQRLTGELQARSE
ELQVQQEELQRSNAELEEKAALLASQNSDIEAKNLQIEQARQELEARAQQLSLASTYKSE
FLANMSHELRTPLNSLLILAQLLAQNPTRNLTPKQVEYAGIIHSAGSDLLQLINDILDLS
KVEAGKMDINPERVHLPQLLDYVDATFRPMTTQKSLDFTVTTAPDAPADLLTDDSRLRQI
LRNLLSNAVKFTERGGVELRIEPAAGSEIPAGLRRRGAIVAFRVRDTGIGIPEQQLESVF
GAFQQADGTTSRKYGGTGLGLSISREIAQLLGGAVTAESTPGQGSTFTLYLPVSWADHEE
PALAGVPAQASGHTEPGTARPGRAGSAALPQQRQARRLLVIEERPNGLLSLVAESADRDF
TPRHQPTGEHGGIQIVNATSSREAAAALATDSFHCVVLELDMPDGEALRFLDALDGDPAL
SSLPVLAHNNPRVRTGQDKALRDRPSARHLELLSSLDELRERIVLHLSADQPGDVLPLVQ
GDTQRRQTSPVPVDDLAGHTVLVVDDDARNLFALSGVLELHGVRVLHAEDGRKGIEALTR
HAGVDLILMDVMMPELDGYAATAEIRRMPEYAALPIIAVTAKAMPGDREKSLASGASDYV
TKPVDADDLIARVRHWLTR
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgggcgggtacggattcactgagcggggcgccggtggtgccgcgcgagggc
gggatcggcgagccggaactgcggctgttgctggccgggctcacagccgtacgcgacggg
gacttccgcacccggctgcccgacgcggcggacgggctgctcggcgagatcgccacggtc
ttcaacgggatggtcaaccagctgtcgctgttcacctccgaggtgacccgggtggcccgc
gaggtgggcaccgagggaaccctgggcggccaggcggacgtccccggggtcgggggagcc
tggctggacctcaccgattcggtcaatttcatggccgggaacctcacggcccaggtgcgc
tccatcgcccaggtcgcgaccgccgtggccaagggcgatctctcccagaagatcaacgtc
accgcgcgcggggagatcctggagctgaaggagaccatcaacacgatggtcgaccagctc
tccggattcgccggcgaggtcacccgcgtcgcccgggaggtcggcaccgagggccggctc
ggcggccaggccgacgtcaagggtgtctccggcacctggaaggacctgacggaatcggtc
aacgtcatggccgacaacctgacggcccaggtccgctcgatcgccgaggtcaccaccgcc
gtggcgcagggcgacctgacgcagaagatcagagtggacgcccggggagagatcctggag
ctgaaggagaccatcaacacgatggtcgaccagctctccgcgttcgccgacgaggtcacc
cgcgtctcccgggaggtcggcaccgagggcaacctgggtggccaggccacggtccggggc
gtctccgggacctggaaggacctcaccgacaacgtcaacgtgatggcctccaacctgacc
ggccaggtgcgctcgatcgcccaggtggccaccgccgtcgcccgcggcgacctgtcgcag
aagatcgtggtggaggcgaagggcgaggtcgccgcgctggccggggtcatcaacacgatg
gtcgacacgctgtccgcgttcgccgacgaggtcacccgcgtcgcgcgtgaggtcggcacc
gagggccggctcggcggccaggcacgggtccccaacgtggcgggaacctggaaggacctg
accgacaacgtcaactccatggccaacaacctcacgggccaggtccgcaacatcgccctc
gtgacgacggccgtcgccaacggcgatctgtccaagaagatcgacgtggacgcccgcggc
gagatcctggagctgaagaccaccatcaacacgatggtcgaccagctctcctccttcgcc
gccgaggtcacccgggtggcccgggaggtgggcagcgagggccggctcggcggccaggcc
gaggtcgagggagtctccggcacctggaagcgcctgaccgagaacgtcaacgaactcgcc
gggaacctcacccgccaggtccgtgccatcgccgaggtcgccagtgcggtcgccgagggg
gacctcaccctctccatcaccgtcgacgcctcgggcgaggtcgcggaactgaaggacaac
atcaactcgatggtgggctcgctgcgcgagagcacccgcgccaaccaggaacaggactgg
ctcaagtccaacctggcccggatctccggcctgatgcagggccaccgcgacctcgccgcc
gtcgccgaactcgtcatggacgaactgacgccgctggtcgccgcccagtacggcgccttc
tacctcgccgaggacggccccgccggtaccgtgctcaccctcgtcggctcctacggccgg
cccgcgggcgccgacgagggcaccggcttcgccctcggcgagtccctcgtcgggcaggcg
gcccgcagccaccggatcatcgccaccgaccaggtccccggcggctacgtgatctcctcc
gggctcggtcacaccaccccgggcagcctgatcatcctgccgatcgtggtggacgaccag
gtcctcggcgtgatcgagctcgcctccttcaccgccttcacccccgtgcaccgcgacttc
ctcggccagctgatggagaccatcggcgtcaacgtcaacaccatcgtcgccaacgcccgc
accgacgaactcctcggcgagtcccagcggctcaccggcgaactccaggcccgctccgag
gaactccaggtccagcaggaggagctccagcgctccaacgccgaactggaggagaaggcc
gccctcctcgccagccagaacagcgacatcgaggccaagaacctgcagatcgagcaggcc
aggcaggagctggaggcccgcgcacagcagctgtcgctggcatccacctacaagtccgag
ttcctggccaacatgagccacgagctgcgcacccccctcaacagcctgctgatcctcgcc
cagctgctcgcccagaaccccacccgcaacctcacccccaagcaggtcgagtacgcgggc
atcatccactccgccggctcggacctgctccagctgatcaacgacatcctcgacctgtcg
aaggtcgaggccggcaagatggacatcaaccccgagcgggtgcacctgccgcagctgctc
gactacgtcgatgccaccttccgcccgatgaccacgcagaagagcctcgacttcaccgtc
accaccgcccccgacgcgccggccgacctgctcaccgacgactcgcggctgcgccagatc
ctgcgcaacctgctctccaacgccgtcaagttcaccgagcgcggcggcgtcgagctccgc
atcgaaccggcggcgggctccgagatccccgcaggtctgcgccgccgcggagccatcgtc
gccttccgggtacgggacacgggaatcggcatccccgagcagcagctggaatccgtcttc
ggcgccttccagcaggccgacggcaccaccagccgcaagtacggcggcaccggcctcggg
ctctccatcagccgtgagatcgcccagctcctcggcggggccgtcaccgcggagagcaca
ccgggccagggcagcaccttcaccctctacctgcccgtcagctgggccgaccacgaggag
cccgccctcgccggtgtgcccgcccaggcgtccgggcacaccgagcccggaacggcccgc
cccggacgcgcggggagcgccgccctcccgcagcagcgccaggcccgccgcctcctggtc
atcgaggaacggcccaacggcctgctctccctcgtcgccgagagcgccgaccgcgacttc
accccccgccaccagccgacgggagagcacggcggcatccagatcgtcaacgccaccagc
tcccgggaagccgccgcggccctcgccaccgattccttccactgcgtcgtcctcgaactc
gacatgcccgacggagaggccctgcgcttcctcgacgccctcgacggcgacccggccctg
tcctcccttccggtcctcgcccacaacaacccccgtgtgcgcacgggccaggacaaggcg
ctgcgggaccggccctcggcgcgccacctggaactgctctccagcctggacgagctgcgc
gagcgcatcgtgctgcacctgtccgccgaccagccgggggacgtactgcccctcgtccag
ggcgacacacagcgccggcagacctcccccgtgcccgtcgacgacctcgccggacacacc
gtcctggtcgtcgacgacgacgcccgcaacctcttcgccctcagcggggtcctcgaactg
cacggcgtccgcgtactgcacgccgaagacggccgcaagggcatcgaagccctcacccgc
cacgcgggcgtcgacctcatcctgatggacgtgatgatgccggagctcgacggctacgcc
gccacggcggagatccgccggatgccggagtacgcggcgctgcccatcatcgcggtcacc
gccaaggccatgcccggggaccgggagaagagcctcgcctccggagccagcgactacgtg
accaaaccggtggacgccgacgacctcatcgcccgcgtccggcactggctcacccgatga
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