Streptomyces goshikiensis: PET44_30775
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Entry
PET44_30775 CDS
T09307
Name
(GenBank) 2'-5' RNA ligase family protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgk03016
]
PET44_30775
Enzymes [BR:
sgk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PET44_30775
Transfer RNA biogenesis [BR:
sgk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PET44_30775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
WBY23663
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All DBs
Position
6986454..6987098
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AA seq
214 aa
AA seq
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MNEPPPTPDGPGAPTGSMAVAPTPRTAVAWLPPAGLWPAIQDIRAVYDPQIRRWPPHVNL
VFGFVPEADFPAAAPLLAARAAEREPFEARLSGVRVFRHRVSATVWIDPAAAGLAPWTAL
RSALIEPFPRCGGRFPAFTPHLSLGRTRDPRSVVAECTARLDVMSARVEEIVLLSRRGDG
PMRPRATISLGTGALRWHSETDPESSRGRNSGGE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagcccccgcccacccccgacggccccggcgcccccaccggatccatggcggtg
gcgcccacaccccggaccgccgtcgcatggcttcccccggccgggctctggcccgccatc
caggacatccgcgccgtgtacgacccccagatccgccgctggccaccccacgtgaacctg
gtcttcggcttcgtcccggaggccgacttcccggcggccgccccgctgctcgccgcccgc
gccgccgagcgggagccgttcgaagcccgcctcagcggagtgcgcgtcttccggcaccgg
gtgtccgccaccgtgtggatcgatcccgccgcggccggcctcgccccctggacggcgctc
cgcagcgccctgatcgaaccgttcccccgctgcggcggacgctttcccgccttcaccccg
cacctgtcgctgggacgcacccgcgatccccggagcgtggtcgccgagtgcaccgcccgc
ctcgacgtcatgtcggcgcgggtcgaagagatcgtgctgctctcccgccgcggcgacggc
cccatgcggccccgcgccaccatctccctgggcacgggcgccctgcgctggcactcagaa
accgacccggagtcatctcgggggaggaattcaggaggggaatag
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