Sodalis glossinidius: SG0251
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Entry
SG0251 CDS
T00316
Name
(GenBank) RNA polymerase sigma-70 factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sgl
Sodalis glossinidius
Pathway
sgl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SG0251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgl03021
]
SG0251
Transcription machinery [BR:
sgl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG0251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
Sas-6-like_oligomerization
HAP1_N
Motif
Other DBs
NCBI-ProteinID:
BAE73526
UniProt:
Q2NWE9
LinkDB
All DBs
Position
complement(465455..467302)
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AA seq
615 aa
AA seq
DB search
MEQNPQSQLKLLVTRGKEQGYLTFAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETTSDTDEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDMAPTA
THIGSELSADEIADDDDEDEEDGDDDSTDDDNSIDPELARQKFVELREQYEITRNVIKTN
GRSHAKSASEILNLSDVFKQFRLVPKQFDYLVNNMRAMMDRVRTQERLIMKLCVEISKMP
KKNFVTLFAGNETSESWFKAALAMNKPWSEKLHEVDDDVYRSLQKLRQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSE
SLRSATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctcaagctgcttgtcacacgtggtaaggagcaaggc
tatttgacctttgccgaggtcaatgaccatctgccggaggatatcgtcgactccgaccag
atcgaagatatcatccagatgataaatgacatgggcatccaggtgatggaagaagcaccg
gatgccgatgacctgctgctggccgaaaccacctccgacaccgacgaagatgcggcggaa
gccgcggcgcaggtcttgtccagcgtggagtccgaaattgggcgcaccaccgaccccgtg
cgcatgtacatgcgcgaaatgggcaccgtggagctgctgacgcgcgaaggcgagatcgat
atcgccaagcgtatcgaagatggcatcaatcaggttcagtgctcggtcgccgagtaccct
gaggctatcacctacctgctggagcagtacgaccgcgtcgaagccggcgaggcccgcctg
tccgatcttatcaccggcttcgtcgaccctaacgcggaagaagatatggcgcccaccgcg
acccatatcggttccgaactctccgccgacgaaatcgccgatgacgacgacgaggatgaa
gaggacggcgacgacgacagcacggacgatgataacagcatcgatccggagttggcgcgg
caaaaatttgtcgagctgcgcgagcagtacgaaattacccgtaacgttataaaaaccaac
gggcgcagccatgctaaatcagcctcggagattttgaatctttccgatgtattcaaacag
ttccgcctggtgccgaagcagttcgattacctggtcaacaacatgcgcgccatgatggat
cgcgtgcgtacccaggaacgtttgatcatgaaattgtgcgtcgaaatcagcaagatgccc
aagaaaaatttcgtcacgctgtttgccggtaatgaaactagcgaaagctggttcaaagcc
gcgctggcgatgaacaagccctggtcggaaaaactgcacgaagtcgatgatgacgtgtac
cgcagcctgcagaaactgcggcagattgaagaagaaaccggtttgaccatcgagcaggtg
aaggatatcaatcgccgcatgtcgatcggcgaagccaaggcgcgacgcgccaagaaagaa
atggtcgaggcgaacctgcgtttggttatctctatcgccaaaaaatacaccaaccgcggc
ctgcagttcctggatctgatccaggagggcaatatcggtttgatgaaggcggtggataaa
tttgaataccgtcgtggttacaagttttccacctacgccacctggtggatccgccaggcc
atcactcgctctatcgccgaccaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaaactcaaccgcatttcccgacagatgctgcaggaaatgggacgcgaaccg
acgcccgaagagctggcggaacgcatgctgatgccggaggataaaatccgtaaggtgctc
aagattgccaaagagcctatctccatggaaactcctatcggcgacgatgaagattcgcac
ttgggggattttatcgaggacaccaccctcgaactgccgctggattccgccacctcggag
agtctgcgttcagccacccacgatgtgctggccggcctgaccgcgcgtgaagccaaggtt
ctgcgcatgcgcttcggtatcgacatgaataccgaccatacgctggaagaagtcggcaaa
cagtttgacgtcacccgcgagcgtatccgtcagatcgaagcgaaagcgctgcgtaagctg
cggcacccgagccgttctgaggtcctgcgcagcttcctggacgattaa
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