Sodalis glossinidius: SG0383
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Entry
SG0383 CDS
T00316
Name
(GenBank) inducible ATP-independent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgl03019
]
SG0383
03009 Ribosome biogenesis [BR:
sgl03009
]
SG0383
Enzymes [BR:
sgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SG0383
Messenger RNA biogenesis [BR:
sgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG0383
Ribosome biogenesis [BR:
sgl03009
]
Prokaryotic type
rRNA helicases
SG0383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_C
CMS1
Cas3-like_C_2
ACBP
Motif
Other DBs
NCBI-ProteinID:
BAE73658
UniProt:
Q2NW17
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All DBs
Position
681911..683794
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AA seq
627 aa
AA seq
DB search
MRHVYMSEVETSFADLGLKAPILNALTDLGYEKPSPIQSACIPHLLAGRDVLGMAQTGSG
KTAAFSLPLLHNIKPELAAPQVLVLAPTRELAVQVGEACADFAKHMKGVNVVALYGGQRY
DVQLRALRQGPQVVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENILA
QVPAEHQTALFSATMPEAIRRITRRFMNEPQEVRIQSSVTTRPDISQSYWTVQGMRKNEA
LVRFLEAEDFDAAIIFVRTKNATLEVAEALELSGYNSAALNGDMNQALREQTLDRLKDGR
LDILIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERR
LLRNIERIMKLTIPEVDLPTAEVLSTRRLAKFAAKVQNQLESSDLDMYRALLAKLQPAEE
LDIETLAAALLKMAQGERPLILSPDSVIERRPRREFCERDERREGGERPPRRERRDVGEM
DLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEMLSHFT
RTRILNKPMNMQFVGEAQSRGGERRGGLGTGRGNYSGERRDGGRRSFSDRREGAGAGERR
FSRDGQRAPRRDGDSAPAGRRRFGGDA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacgtgtacatgtctgaagtagaaacctcttttgccgatctggggctgaaagct
cctatccttaacgcactgaccgatctcggttatgaaaagccgtcgcccatccagtctgcc
tgtattccgcacctgctggccggccgtgacgtattggggatggcgcagactggcagcggt
aaaaccgcggccttttccctgccgctgttgcacaatatcaaacctgaactggccgcgccg
caggtgctggttctggcaccgacccgcgaactggcggtacaggtaggagaagcctgtgcc
gatttcgccaagcatatgaaaggcgtcaacgtggtcgccctgtacggtggtcagcgttat
gacgtgcaattacgcgctctgcgccagggaccgcaggtcgtggtcggcacgccgggccgt
ctactggatcatctgaaacgcggtacgctggatttgtccaatttgagcggactggtgctg
gacgaagccgatgaaatgctgcgcatgggctttatcgaagacgtcgaaaacattctggcg
caggtgccggcggagcatcaaaccgcgctgttctccgccaccatgccggaagcgattcgc
cgcatcactcgccggttcatgaatgaaccgcaggaggtgcgcattcagtccagcgtgacc
acccgtcctgatatcagccagagctactggacggttcagggtatgcgcaagaacgaagcg
ctggtgcgtttcctggaagcggaagatttcgacgccgccattatctttgtgcgcaccaaa
aacgcgacgctggaagtggccgaagcgcttgagcttagcggttacaacagcgctgccctg
aacggcgacatgaaccaggcgctgcgtgagcagacgctggatcgcctgaaggatggccgt
ctggatattctgattgccaccgacgtcgccgcccgcggcctggacgttgatcgcatcagc
ctggtggtaaattacgatattccgatggattccgaatcctacgtgcaccgtatcggccgt
accggtcgtgccggccgcgctggccgggcgctgttgttcgtggaaaaccgcgagcgccgt
ctgctgcgcaatattgagcgcatcatgaagctgaccatcccggaagtagacctgccgacc
gccgaagtgctgagcacccgtcgcctggccaagtttgccgccaaggtacaaaaccagctg
gaaagcagcgatcttgatatgtaccgcgcgctgctggcgaaattgcagccggcggaagag
cttgatatagaaacgctagccgcggcactgttgaaaatggcccagggcgaacgtccgctg
atcctgtcgccggattcggtgattgaacgccgtccgcgccgcgagttctgcgagcgtgac
gagcgccgggagggtggcgagcgtccgccgcgccgtgaacgtcgtgatgtgggcgaaatg
gatctctaccgtatcgaggtgggccgtgatgatggggtggaagtccgtcacatcgtcggc
gcgatcgccaacgaaggggatatcagcagccgctatatcggcaatattaaattattcgcc
tcgcactcgaccatagaactgccgaaaggcatgccgggtgaaatgctgtctcacttcact
cgtacgcgtattctcaacaagccgatgaatatgcagtttgtcggtgaagcgcagtcgcgc
ggcggcgaacgtcgcggcggcctgggcaccggtcgtggcaactacagcggtgaacgccgc
gatggcggccgccgcagcttcagcgatcgtcgtgagggcgctggcgccggagaacgccgt
ttcagccgtgacggtcagcgtgcgccgcgccgcgatggcgacagcgccccagccggccgc
cgtcgtttcggtggtgatgcataa
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