Sodalis glossinidius: SG0907
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Entry
SG0907 CDS
T00316
Name
(GenBank) excision nuclease subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sgl
Sodalis glossinidius
Pathway
sgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG0907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG0907
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG0907
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG0907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
RRP36
AAA_22
DUF87
Peptidase_S15
Motif
Other DBs
NCBI-ProteinID:
BAE74182
UniProt:
Q2NUJ3
LinkDB
All DBs
Position
1471995..1474004
Genome browser
AA seq
669 aa
AA seq
DB search
MSKAFKLVSSFEPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIEDLNRPT
MVLAPNKTLAAQLYGEMKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDAYLKMMLHLTRGMLVSQRSIVNRLSELQ
YTRNDQAFQRCTFRVRGEVIDIFPAESDEVALRVELFDDEVERLSLFDPLTGHVDQEVPR
YTIYPKNHYVTPRERLVQAMEDIKVELAERRESLLASGKLLEEQRLSQRTAFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFAAMAPQTIYVSATPGPYELEMCGNDIIDQLVRPTGLLD
PQIEVRPVSTQVDDLLSEIRRRVQINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
ETVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVVILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITPSMARAIEETERRREKQHAYNLANGIVPQALNKRIADIMELG
QSPVHDKHKKRKAMEAAAKYGDLTPKALEQKIRELETRMQQHAQNLEFEEAASVRDQIHA
LREQFIAVS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcatttaaactggtttcatcgtttgaaccgtccggcgatcagccggaggct
attcgtcgcctggaggaagggttggaggatggtctggcccatcagactctgctcggcgtg
accgggtcagggaaaacctttaccgtggctaacgtgatagaggatttaaaccgtcccacc
atggtgctggcgcccaataaaacgctggcggcgcagctgtacggcgaaatgaaggcgttt
ttccccgataatgcggtggagtattttgtctcctattacgactattatcagccggaagct
tatgtgcccagctccgatacctttatcgagaaggatgcgtcggtcaacgagcatatcgag
cagatgcgtttatccgccaccaaagcgctgctggagcgacgcgatgtcatcgtggtcgcc
tcggtttccgctatctatggcctgggggatcctgatgcgtatctgaagatgatgctgcac
ctgacgcgcggcatgttagtctcccagcgcagcatcgttaaccgtctttcggagctgcaa
tatacccgcaacgatcaggcatttcagcgctgcacgtttcgcgtgcgcggcgaagtcatc
gatattttccccgccgaatccgacgaagtggcgctgcgcgttgagctgtttgacgatgaa
gtggagcgcctgtcgctgtttgatccgctcaccggtcacgtcgatcaggaagtgccccgt
tacactatctatcccaagaaccactatgtcaccccgcgcgagcggctggtgcaggcgatg
gaagatatcaaagtggagctggccgaacggcgcgagtcgctgctggccagcggcaaactg
ctggaagagcagcgtctgtctcagcgtaccgccttcgatctggaaatgatgaatgagctg
ggctactgctcggggatcgagaactactcccgctatttgtcgggacgcgggccgggcgaa
ccgccgccgacgctgttcgattatttgccggctgacgggttgctggtggtggacgaatcc
catgtcaccattccgcaaatcggcgggatgtaccggggcgatcgggcgcgtaaagagact
ctggtggaatacggtttccgcctgccgtcggcgctggacaaccggccgatgaagtttgaa
gaattcgccgcgatggcgccgcagaccatttatgtttccgcgacgcccgggccctatgaa
ctggaaatgtgcggcaatgacatcatcgatcagctggtgcggccgaccggtctgttggat
ccgcaaatcgaggtgcggccggtcagcacccaagtggacgatctgctgtcggaaatccgc
cgccgggtgcagataaacgagcgggtgctggtcacgacattgaccaagaggatggcggaa
gatttgactgaatatcttgaagagcacggcgaacgggtgcgctatttgcattcggatata
gaaaccgtagagcgggtggaaatcatccgcgatttgcgtctcggcgaattcgacgtgctt
gtcggcatcaacttgctgcgtgaggggctggacatgcccgaagtgtcgctggtggtgata
ctggacgccgataaagagggctttttgcgctccgagcggtcgcttatccagactatcggc
cgcgcggcgcgtaacctcaacggcaaagctatcctgtacggcgataagatcacgccgtca
atggcgcgcgcgattgaggaaaccgagcggcggcgcgagaaacagcatgcctataatctc
gccaacggtatcgtgccgcaggcactgaataagcgcattgccgatatcatggagctgggc
cagtcgccggtgcacgacaagcataaaaaacgcaaggcgatggaggcggcggcgaaatat
ggcgatttgacgccgaaagcgctggaacagaagattcgcgaactggaaacccgcatgcag
cagcatgcgcagaatctggaatttgaagaggccgccagcgtgcgcgatcaaattcacgcg
ctgcgtgagcaatttatcgccgtttcctga
DBGET
integrated database retrieval system
