Sodalis glossinidius: SG1973
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Entry
SG1973 CDS
T00316
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SG1973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG1973
Enzymes [BR:
sgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SG1973
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG1973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
AAA_25
AAA_30
PDDEXK_1
ZMYND8_CC
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAE75248
UniProt:
Q2NRH7
LinkDB
All DBs
Position
complement(3401801..3405343)
Genome browser
AA seq
1180 aa
AA seq
DB search
MKTAESLDPMTLPLQGTRLVEASAGTGKTYTLAALYLRLLLGLGGEAAFPRPLSVEEILV
VTFTEAATEELRGRIRDNIHRLRLACMRGESEDPLLAALLAQLDDHRLAALHLLAAERQM
DEAAIFTIHGFCQRMLNHSAIESGMLFQQTLLEDETLLRQQVSADFWRRHCYPLPLEVAR
MVQQHWEGPENLLAELLPYLQGEPPEVRDPPALSESVLARHARIIAGIDDLKRQWRAAAA
EIPTILDAHKLDRRVYSSKNLPSWMAKVNCWAEQHTVDYQVPDELERFTSAVLAEKTTAG
DPPHYELFAAVQAFYQHRTSLRDLIFVMALAEMRQALEQEKQRRAELGFDDLLNRLDRAL
AGRGGEALAESVRSRYPVAMIDEFQDTDPQQYRIFRHVYGGKPDCALLLIGDPKQAIYAF
RGADIFTYMRARSEVDAHYTLYTNWRSAPGMINAVNQLFQSLPAPFIFSAIPFLPVAAAE
SNACLRLVVERQPQPALRVWLQPGAGVGVSEYQQCMVQQCAATIRDWLDAAREGEAWLEG
RRGRQPLQASDITVLVRNRHEAALMRDALAALMIPAVYLSNRDSVFDTPEARELLWILQA
VLTPEKDTALRTALATGLLGFDAVAIDALNNDERRWEQRVEEFAGYRQRWQKSGVLPMLR
QMMMNHRIAENLLASQGGERRLTDVLHLGELLQEASTQLENEYALVRWLALQIASPNPQA
ANQQLRLESDRHLVQIITVHKSKGREFPLVFLPFAADFRVQKRPLFHDREAYGAWLDLRA
AQESLRLAEEERLAEDLRLLYVAVTRSIYHCSLGIAPLYRGSRKKTGASDLHLSAPGYLI
QQGQNGDADDLRECLAALASRADGDIVLCEAQAAPAQPLTPAAAPAQALSARRWPEPPCD
PWRVTSYSGLQRHGSSVVMELQPRLDIDAAGEGRQQETLQLTPHTFPRGAAPGTFLHGLF
ETLDFNRPLDPQWLSEQLAQQGIDVVWLPVITDWIEKIIAMPLDGGSLSLARLTPDSRQA
ELQFYLPIDALVQARDLDQICKRYDPLSARCPALDFPQIKGMLKGFIDLVFRWQGRYYLL
DHKSNWLGEESAAYTRPAMEQAMIAHRYDLQYQLYTLALHRYLRHRLADYHYSRDFGGVY
YLFLRGVDAAQPGNGIFHCRPDSALIDGLDALFTGATRLT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccgccgagagccttgaccccatgacattgccgttgcaggggacccgccttgtg
gaagcgtcggcggggacggggaaaacctacaccctggccgcgctttatctgcgtttgcta
cttgggctaggcggcgaggcggcgtttcctcggcccttaagtgtagaagaaatactggtg
gtgacctttaccgaggctgccaccgaggagctgcgcggccgtatccgcgacaatatccac
cggttgcggctggcctgcatgcgcggtgaaagcgaggacccgctgctggcggcactgttg
gcgcagctcgacgatcataggcttgccgctctgcatttgctggcggcggagcgacagatg
gacgaggcggcgatatttaccattcatggcttttgccaacgtatgttgaaccacagcgcc
atcgaatcgggcatgctgtttcagcagacactgctggaagatgaaacgctgctgcgccag
caggtgagcgctgacttctggcgccgccactgctatccgttgccgctggaagttgcgcgc
atggtacagcagcactgggaagggccggaaaacctgctggcggaactgctgccctatctg
cagggagagccgccggaggtacgcgatccgccggcgttaagtgagtccgtcctggcacgg
catgcgcgcatcattgccggtattgacgacctgaagcgacagtggcgtgcggcggcggcg
gagatcccgacgatccttgacgctcacaaactcgaccgtcgggtttatagcagcaaaaac
ctgccgtcctggatggcgaaagtcaattgctgggcggagcagcacaccgtcgattatcag
gtccctgatgagctggaacggtttacaagtgcggtattggcagaaaaaacgaccgctggc
gatccgcctcactatgagctatttgctgcggtgcaggccttttatcagcacaggacttct
ctgcgcgatttgatctttgttatggcgctggcggagatgcgtcaggcgcttgagcaggaa
aaacagcggcgggcggagctagggttcgacgatttgctaaatcgtttggatcgggcgctg
gccggccgcggtggtgaagccttggccgaatcggtgcgctcacgctatccggtagcgatg
attgatgaatttcaggataccgacccgcaacaataccgtattttccgtcacgtatacggc
ggtaaacccgattgtgccctactgctgataggcgacccgaaacaagcgatctacgcgttt
cgcggcgcagacatttttacctatatgcgtgcccgcagtgaagtagacgctcactatacc
ctttataccaactggcgctcagcgccggggatgatcaatgcggtgaatcagctgttccaa
agcctgccggcgccgtttattttcagcgcgatcccctttttgccggtggcagccgcggaa
agcaacgcctgtttgcggctggtcgtggaacgacagccacagccggcgctgcgcgtttgg
ctacagccgggggccggcgtgggtgtaagcgaataccaacagtgtatggtgcagcaatgc
gccgctaccatccgcgactggctggacgccgcgcgtgagggagaagcctggttggaaggc
cgtcggggccggcagccgctgcaggcgtcggatatcacggtgctggtacgcaaccgccac
gaggcggcattgatgcgtgatgcgctggcggcgctgatgatcccggcggtgtatctgtct
aaccgggatagcgtctttgacacgcccgaggcgcgcgaactgctgtggattttgcaggca
gtgttgactccagagaaggataccgcgctgcgcacggcgttggccactggcctgctgggc
ttcgacgccgtcgctattgacgcgctgaataacgatgaacggcgctgggaacagcgggtt
gaggagttcgccggctatcgccagcgctggcaaaaaagcggcgtattaccgatgctgcgt
cagatgatgatgaaccatcgcatcgcggaaaatcttttggccagccagggcggcgaacgc
cggttgaccgacgtgctgcatttgggcgaactgctgcaggaagcctcgacacagctggag
aacgaatatgcgctggtccgctggctggcgttgcaaatagcgtctcctaacccgcaggcg
gcaaaccagcaattgcggctggaaagcgatcgtcatctggtgcaaatcatcacggtacat
aaatcaaaagggcgggaattcccgctggtgttcctgccgttcgcggccgattttcgcgtg
caaaagcggccgctgttccacgatcgcgaagcctacggggcatggctggatctccgcgcg
gcgcaggagagtctgcggctggcggaagaggagcgactggcggaggatttgcggctgttg
tacgtggcggtaacgcgctccatttatcattgcagtctcggcattgcgccactgtatcgc
ggtagccgtaaaaaaaccggcgccagcgatctacatctaagcgcaccgggttatctgatt
cagcaaggccagaacggcgatgccgatgatttgcgtgaatgcttggcggcgctggcaagc
cgcgctgatggcgatattgttctgtgtgaggcgcaggccgcgccggcgcaaccgcttaca
cctgcggcggcgccagcgcaggcgctaagcgcccgccgctggcctgaaccgccgtgcgat
ccctggcgggtcaccagctattccggattgcaacggcacggcagctcggtggtgatggag
ttacagccgcggctggatatcgacgccgcgggggagggccggcagcaggagacgttgcag
ctgacgccacatacctttccgcgcggcgcggcgccggggacgtttttgcacggcctgttt
gaaaccctggattttaatcggccactggacccgcagtggctcagcgaacagctggcacaa
cagggtatcgatgtcgtctggttgccggtgataacggactggatagaaaaaattatcgct
atgcctctggacggcggctcgctttctctcgcgcgactgacacccgacagccggcaggct
gaactgcaattttatctgcccatcgacgctttggtgcaggcgcgcgacctggatcagatc
tgcaagcgctacgatccgctgtcggcacgttgcccagcgctggatttcccccagatcaag
ggaatgctgaaggggtttattgacctggttttccgctggcagggccgctattacctgctg
gaccataaatccaactggctgggggaagagagtgccgcctacacccggccggcgatggag
caggctatgattgcccaccgctatgatctgcagtatcagctgtataccctggcgctgcac
cgctatctgcgtcaccgtctggcggactatcattattcgcgcgatttcggcggcgtgtat
tatctgtttctgcgcggcgttgatgcggcgcagccggggaacggcattttccactgccgc
ccggatagcgccttaatcgacgggctcgacgcgttattcaccggcgcaacgcggctaacg
tag
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