Sodalis glossinidius: SG1991
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Entry
SG1991 CDS
T00316
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03410
Base excision repair
sgl03430
Mismatch repair
sgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG1991
03430 Mismatch repair
SG1991
03440 Homologous recombination
SG1991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG1991
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SG1991
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SG1991
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SG1991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAE75266
UniProt:
Q2NRF9
LinkDB
All DBs
Position
complement(3447011..3448747)
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AA seq
578 aa
AA seq
DB search
MNMTTELRRRPLSDSAVLAEADIPPLLKRLYVQRGVCAVGELERGVRGLLAYHTLTGIEQ
AVDLLIRALADQRRIMVVGDFDADGATSTALTVLALRQMGAQTIDFLVPNRFEDGYGLSP
EVVEQAAARGAQLILTVDNGISSHAGVTLAHEKGIPVLITDHHLPGDTLPAAEAIVNPNL
RDCTFASKSLAGVGVAFYLMLALRARLNDSGWFTQRGIAAPKLAELLDLVALGTVADVVP
LDANNRILVHQGLSRIRAGRCRPGIRALAEVANRDITRLCASDLGFALGPRLNAAGRLDD
MSVGVALLLSEDLPQARMLAAELDALNQTRREIEHGMEAEALALCQSMARDEQAMPFGLA
IYHEQWHQGVVGILASRIKERFHRPVIAFAPAGEGVLKGSGRSVAGLHMRDLLERLDTLH
PGMILKFGGHAMAAGLTLEHAQFERFRQRFAELVDEWLDPAMLEGVIWSDGELAGQELSL
TTAELLRDGGPWGQGFPDPLFDGRFRVLNQRLVGEKHLKLLLEPVAGGPMLDGIAFNIDS
RLWPDNSVHTVELAYRLEVNEFRGNRSLQLLIQHIWPL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatgacaacggaattgcgtcggcgtccgctgagcgatagcgctgttctggctgag
gcggatatcccgccgctgctgaaacgattgtatgtgcaacgtggcgtctgtgcggtcggt
gagctggagcggggggtgcgcgggttgctggcttatcataccctgaccggcatcgagcag
gcggtggatctgctgatccgcgccctagcggatcagcgcagaataatggtggtcggcgac
ttcgacgcggacggcgcgaccagcaccgcgcttacggtgttggcgctgcggcaaatgggc
gcacagacgatagatttcctggtgccgaatcgctttgaagatggctacggccttagccca
gaggtggtggagcaggcggcggcgcgcggcgcgcagcttatcctgaccgtggataatggt
atctcttcccatgccggcgtcaccctggcgcatgagaaaggcatcccggtgctcatcact
gatcatcatctccctggcgacaccctgccggccgctgaggccatcgttaatcccaattta
cgcgattgcaccttcgcctcgaaatccctggcgggtgtcggagtggcgttttatctgatg
ctggcgctgcgcgcacggctcaacgacagcggctggtttacacagcggggcatagctgcc
cccaaactggctgaactgctggacctggtggcgctgggtactgtggcggacgtggtgccg
ctggacgccaataaccgtatcctagtgcatcaggggctaagccgcattcgcgccggccgt
tgccgtcccggcatccgcgccctggcggaggtggccaaccgcgatattacccggctgtgc
gccagcgacctgggttttgcgctgggaccgcgcctcaacgccgccgggcggttggacgat
atgtcggtcggagtcgcgttgctgctgagcgaggatctgccgcaggcgcgcatgctggcg
gcggagctcgatgccctcaatcaaacccggcgtgaaatcgaacatggaatggaagcggaa
gcgctggcgctgtgccagtcaatggcgcgcgacgagcaggcgatgcccttcgggctggct
atctaccatgagcaatggcatcagggggtggtgggtattctggcgtcgcggattaaagag
cgttttcaccggccggttattgcttttgcgccagcgggtgagggagtactgaaaggatca
ggacggtcggtagccggtttgcacatgcgcgatctgcttgagcggctggacaccttgcat
cccggtatgatactgaaatttggcggccacgccatggcggccggcctgacgctggagcat
gcgcagttcgagcgttttcgccagcgtttcgccgaattggtggatgagtggctcgatccc
gcgatgctcgaaggcgtgatctggtcggacggcgagctggccggccaggagttgtcgttg
accaccgccgagctgctgcgtgacggcggtccctgggggcaggggtttccggatccgctg
tttgacgggcggtttcgcgtgctcaatcagcgtttggtgggagagaaacacctgaaactg
ctgctcgaacccgtggcgggaggccccatgctggatggtatcgctttcaatatcgactcg
cgcctatggccggataatagcgtgcataccgtcgagttggcctacaggctggaggttaac
gagtttcgcggtaaccgctccctgcagcttttaatacagcatatttggccgctgtag
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