Sodalis glossinidius: SG2235
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Entry
SG2235 CDS
T00316
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03030
DNA replication
sgl03410
Base excision repair
sgl03420
Nucleotide excision repair
sgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG2235
03410 Base excision repair
SG2235
03420 Nucleotide excision repair
SG2235
03440 Homologous recombination
SG2235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgl03032
]
SG2235
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG2235
Enzymes [BR:
sgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG2235
DNA replication proteins [BR:
sgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SG2235
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SG2235
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG2235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAE75510
UniProt:
Q2NQR5
LinkDB
All DBs
Position
complement(3889787..3892570)
Genome browser
AA seq
927 aa
AA seq
DB search
MVQIAENPIILVDGSSYLYRAYHAFPPLTNRAGEPTGAMYGVLNMLKSLLVQYRPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIAPLHDMVKAMGLPLLAVSGVEADDVIGT
LALAAARGGRDVLISTGDKDMAQLVSPKITLINTMSNTILGPEEVQLKFGVPPELIIDYL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLESLYQQLDSVSSLSFRGAKTMAAKLEQHR
EVAFLSYQLATIKTDVPLDLPYDRLTVEEPEAEALMLLFQRYEFKRWLSDLEAGKWLQRK
SAVAPSPPFTAPRPAAAEEPTEALSKDGYVIIDTMATLEMWIGAIRHAGVFAFDTETDGL
DTLTANLIGLCFAVKPGEAAYLPVGHDYLDAPDQLDRATVLAALKPVMEDPTIGKIGQNL
KFDRGVLKRYDIELAGIAFDTMLESYVLDSVAGRHDMDSLAERFLQHTTVSFEEIAGKGR
NQLTFNQIAMEQAASYAAEDADVTLRLHQKLWPRIEQAPELRRVFEEIEMPLVPVLSRIE
RTGVLIDESILAAHSVELAKRLEELEGEAHQLAEEPFNLSSTKQLQEILYDKQKLPVLKK
TPGGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPQMINPLSKRVHTSYHQ
AVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPPDALIVAADYSQIELRIMAHLARDP
GLLNAFAAGKDIHRATAAEVFGMSLEKVTQDQRRSAKAINFGLIYGMSAFGLARQLSVPR
SEAQKYMNLYFERYPGVLEYMERTRRQASDRGYVETLDGRRLYLLDIHSRNGMRKKGVER
AAINAPMQGTSADIIKRAMIAIDGWLQQEAPPVRMIMQVHDELVFEVQRDAVESAKARIK
ALMEGCFKLDVPLQVDVGVGENWDQAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaatcgcagaaaacccgattattttggtggatggttcttcttatctttaccgc
gcctatcacgcctttccgccgctgaccaatagagcgggggaaccgaccggggcgatgtac
ggcgtattgaatatgcttaagagcctgctggtacagtaccggccaagccatgttgcggtg
gtgtttgacgccaagggcaagacgttccgcgatgagttgttcgagcattacaaatcccac
cggcctcccatgccggacgatctgcgtagtcagatagcgccgctgcatgatatggttaaa
gcgatgggtttgccgttgctggccgttagcggcgtcgaggccgatgacgttatcgggacg
ctggcgctggcggcggcgcgcggcggccgggatgtgctgataagcaccggcgataaggac
atggcgcagctggtgtcgcccaagattaccctgatcaataccatgtccaacaccattctc
ggcccggaggaggtgcagctgaagttcggcgtgccgccggagcttatcattgattatctg
gcgctgatgggcgacagctccgataatattccgggagtgccgggagtgggtgagaaaact
gcgcaggcgctattgcaggggctgggcgggctggaaagcctgtatcaacagcttgatagc
gtcagtagcctgagcttccgcggcgctaaaaccatggccgctaagcttgagcagcaccgt
gaggtagcttttctctcctaccagctggcgaccattaaaaccgatgtgccgttggacttg
ccttatgaccggttaacggtggaagagcccgaggccgaagcattgatgcttttgtttcag
cgttatgaattcaaacgctggctaagcgatttggaagcgggtaaatggctgcaacgcaaa
agtgccgtcgcgccgtcgccgccgtttactgcgccccgtccagcggcggccgaggagccg
accgaggcgttgtcgaaagacggctatgtgattatcgacactatggcgaccctggagatg
tggatcggtgcgattcgccacgctggcgtgttcgcctttgataccgaaaccgacggtctg
gatacgcttaccgccaatctgatagggctgtgttttgctgtgaagccgggtgaggcggcc
tatctgccggtggggcacgactatctggatgcgccggaccagcttgaccgcgcgacggta
ttggcggcgctgaaaccggttatggaagatcccaccatcggcaagattggccaaaatctc
aaattcgatcgcggggttctgaaacgatacgatatcgagctggccggcattgcgttcgat
accatgctggaatcttacgtgttggacagcgtcgccggccgccacgatatggacagcctg
gcagagcgttttttacagcacaccaccgtgagctttgaggagatagcgggtaaaggccgc
aatcagcttacgttcaatcagatagcaatggagcaggccgcgtcttacgctgctgaagat
gccgacgtgacgctgcgtctgcaccaaaagctgtggccacgtattgagcaggccccggag
ctgaggagggtgtttgaggaaatcgaaatgccgctggtgccggtcctgtcgcgtattgag
cgcaccggcgtgcttatcgacgaatctattcttgctgcacattcggtggagttggccaaa
cgcctggaagagctggaaggggaagcgcatcaactggcggaggaaccgtttaacctctcc
tccaccaaacagctgcaggagattttgtacgataagcagaaattgccggtgctaaagaaa
acccccggcggtgccccttctaccaatgaagaagtgctggccgagctggcgctggactat
ccgctgccgaagctgattttagaatatcgtggcctggccaagctaaaatccacctacaca
gataagctgccacagatgatcaacccgctgtcgaagcgggtgcatacctcctatcatcag
gccgtcaccgctaccgggcggctgtcctcgagcgacccgaacctgcaaaatattcccgtc
cgcaatgatgaaggtcggcgcatccggcaggcgttcatcgcgccgccggatgcgcttatc
gtggcagcggactattcacagattgagctgcgcattatggcgcatctcgcgcgcgacccc
ggattactgaacgccttcgctgccggcaaggatattcaccgtgccaccgccgccgaagta
tttggtatgtcgctcgagaaagtcacccaggatcagcgccgcagcgccaaggcgattaac
tttggcctgatttatggcatgagcgctttcggtctggcgcgtcagctgtcggtgccgcga
tcggaagcgcagaaatatatgaatctctatttcgagcggtaccccggcgttttggaatat
atggagcgcacccgcaggcaggccagcgatcggggttatgttgaaaccctggacggccgc
cggctgtatttactggatatccactcgcgcaacggtatgcgcaaaaagggcgtggagcgc
gccgctattaacgccccgatgcaaggcacctccgctgatattattaagcgggcgatgatt
gcaatcgatggctggctgcagcaggaagcgccgccggttcgcatgattatgcaggtgcac
gatgaattggtatttgaagtacagcgcgatgcggttgaaagtgccaaagcccgaattaag
gcgctgatggaaggctgctttaaactggatgtaccgctgcaggtggacgtgggcgttgga
gaaaactgggatcaagctcactaa
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