Sodalis glossinidius: SG2337
Help
Entry
SG2337 CDS
T00316
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG2337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgl03019
]
SG2337
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG2337
Enzymes [BR:
sgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG2337
Messenger RNA biogenesis [BR:
sgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG2337
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG2337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
DUF6972
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAE75612
UniProt:
Q2NQG3
LinkDB
All DBs
Position
complement(4013055..4014932)
Genome browser
AA seq
625 aa
AA seq
DB search
MSTAEIIQREVLAEQVLHDTFGYQQFRPGQQAIIHAVLSGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQYEVMAACRAGRIKMLY
IAPERLMMDNMLEQLQQWRLAMIAVDEAHCISQWGHDFRPEYRALGQIKRHFTTLPFLAL
TATADEATRQDILRLLDLRDPLVQLSSFDRPNIRYTLVEKYKPFEQLWHFVQGQRGKSGI
IYCNSRSRVEDLSARLQSRGVSVAAYHAGLENARRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVLHFDIPRTIESYYQETGRAGRDGLPAEAILLYDQADMAWLRRCLEEKPIGQQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQMACGNCGNCGNCGNCGNCDICLDPPK
RYDGLEEARKALSCIYRVGQRFGMAYVVEVLRGANSQRIRENAHDRLPVYGIGRERSNEH
WISLLRQLIHLGLVSQNITQHSVLQLTESARPVLRGEVDLMLAEPRVTNLKTRSAPKTYG
GNYDRPLFAKLRKLRKALADEANVPPYVVFNDATLLEMAEQLPTDSGQMLRVNGVGNRKL
ERFGLPFLALIREHLSDEGSRPTLR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggaaataatccagcgggaagtgttggcggagcaggtgttgcacgacacc
ttcggctaccagcagtttcggccgggccagcaagcgatcattcacgcggtgctcagcggc
cgagactgtctggtggtcatgcccaccggcggcggtaaatcgctgtgctatcagatccct
gctctggtgatggacgggctgacgctggtagtctcgccgctgatttcgctgatgaaggac
caggttgatcaactgctggccaacggcgttgcggcggcctgcctgaactccacccaaagt
cgcgagcagcagtacgaggtgatggcggcgtgccgcgccgggcgcattaaaatgctctac
atcgcccccgagcgtctgatgatggacaacatgctcgagcaattgcagcagtggcggctg
gcgatgatcgctgtggacgaggcgcactgcatttctcaatgggggcatgacttccgcccg
gaatatcgcgcgctcggacaaatcaaacgtcatttcacgacgctgccgttcctcgcgctg
accgccaccgcggatgaagcgacgcggcaggatatcctgcgcctgctggacttacgcgat
ccgctggtccagctcagcagcttcgaccgtcccaatatccgctacacgctggtggagaag
tacaaaccctttgagcagctctggcacttcgtgcagggccagcgcggtaaaagcggtatt
atttattgcaatagccgttcgcgggtggaagatctgagcgcgcgtttgcaaagtcgcggc
gtcagcgtggccgcctatcacgcgggcctggaaaacgctcgccgcgctcaggtgcaagag
gcgtttcagcgtgacgatttgcaggtcgtggtggcgacggtcgccttcggcatgggcatc
aataagcccaacgtgcgctttgtgctgcacttcgacatcccgcgcaccatcgaatcctat
taccaggaaactggacgtgccggccgcgacggtctgccggcagaagccattttgctgtat
gatcaggcggacatggcctggctgcggcgctgtctggaagagaaacctatcggccagcag
caggacatcgagcgccataagctcaacgcaatgggcgccttcgccgaggcgcagacctgc
cggcggctggtgctgctgaactatttcggcgaaggtcgtcagatggcatgcggcaactgc
ggcaactgcggcaactgcggcaactgcggcaactgcgacatctgccttgatccgcccaag
cgctacgatgggctggaagaagcgcgcaaagcgctctcctgcatttaccgggtcgggcag
cgtttcggtatggcctatgtcgttgaggtactcagaggcgccaacagccagcgtatccgc
gaaaatgcgcacgaccggctgccagtttacggtatcggccgcgagcgcagcaatgagcat
tggataagcctgctgcggcaattgatccatctggggctggtcagccagaatattactcag
cattcggtgttacagctaacagagtcggcgcggccagtgctcaggggtgaggtggacttg
atgctggcggagccgcgggtgaccaatctgaaaacccgctcggctcccaaaacctacggt
ggcaactatgatcgcccgctgttcgccaagctgcgcaagctgcgtaaagcgctggcggat
gaggccaatgtcccgccctatgtggtgtttaacgacgccacgctcttggaaatggcagag
cagctgcccaccgacagcggccagatgctgcgggttaatggggtgggcaaccgcaaactg
gagcgtttcggtctgccgtttctggcccttatccgtgaacacctgtctgatgagggctcg
cggccgaccctgcgttaa
DBGET
integrated database retrieval system
