Sodalis glossinidius: SG2342
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Entry
SG2342 CDS
T00316
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgl
Sodalis glossinidius
Pathway
sgl03420
Nucleotide excision repair
sgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG2342
03430 Mismatch repair
SG2342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgl03400
]
SG2342
Enzymes [BR:
sgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG2342
DNA repair and recombination proteins [BR:
sgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG2342
MMR (mismatch excision repair)
Other MMR factors
SG2342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAE75617
UniProt:
Q2NQF8
LinkDB
All DBs
Position
complement(4019657..4021819)
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AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVVAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSVMAV
TFTNKAAAEMRHRIEHLVGTSQGGMWIGTFHGLAHRLLRAHHQDANLPQDFQILDSEDQL
RLLKRLIRAMNLDEKQWPPRQAMWYIGGKKDDGLRPQHVESYGNPVEATWQRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILRHYRERFTNILVDEFQDTNQIQYAWIRMLAGDD
GNVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAQTIRLEQNYRSTSNILQAANALIAHN
GGRLGKNLWTEGAEGEPITLYCAFNELDEALFVVNRIKVSQEQGGALKDCAILYRSNAQS
RVLEEALLQTGLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPPRGLGD
RTLDVVRQTARDRQLTLWQSSRALLAERVLAGRAAAALQRFLELIDALAEETAELPLHVQ
TDRVIKNSGLWSMYEQEKGEKGQARIENLEELVTATRQFSYNDEDQDLLPLQAFLSHAAL
EAGEGQADSYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMDKLTITYAETRRLYGKEAYHRPSRFVGELPPACVEEVRLRASVTRPASQQRIG
APLSESDSGFTLGQRVRHPKFGEGTVVNLEGSGEHSRLQIAFQGQGIKWLVVAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatttgctcaacagcttgaacgacaagcaacgggaagccgtggtggcg
ccgcgcggtaatttgctggtgctggccggcgccggcagcggcaaaacgcgggtgctggtg
catcgtatcgcctggctgctgtcggtggaaaattgctcgccctattcggtaatggcggtc
accttcaccaacaaggcggcggcggagatgcgccaccgcatcgaacatctggtgggcacc
agccagggcggcatgtggatcggtaccttccatgggctggcccatcgcctgttgcgtgcc
caccatcaggatgccaacctgccgcaggattttcagatcctcgatagtgaagatcaactg
cgcttgttaaaacgccttatccgcgccatgaatctggatgagaaacagtggccgccgcgc
caggcgatgtggtatatcggcggcaaaaaagacgatggactgcgtccgcagcatgtggag
agttacggcaatccggtcgaggcgacctggcagcgcatctatcaggcctatcaggaagcg
tgcgaccgcgccgggctggtggattttgccgagctgctgctgcgcgcccacgagctgtgg
ctaaacaagccgcatattctgcgccactaccgcgaacgttttaccaatatcctggtggat
gaattccaggataccaaccaaattcaatacgcctggatccgcatgctggccggcgatgac
ggcaatgtgatgatcgtcggcgacgatgaccagtcgatctacggctggcgcggggcgcag
gtagaaaacatccagcgcttcctggacgatttccccggcgcgcagaccattcgattggag
caaaattaccgctccaccagcaatatcctgcaggcggccaacgcccttatcgcccacaac
ggcggccggctgggcaaaaatctgtggaccgagggcgctgaaggcgaaccgattaccctt
tactgcgcctttaacgaactggacgaggcgctctttgtggtaaaccgcatcaaggtaagc
caggagcagggtggggcgctcaaggactgcgccattttgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttgcaaacggggttgccttaccggatttatggaggtatg
cgcttcttcgagcgtcaggaaatcaaggatgcgctggcctatttgcggcttatcgccaac
cgcaacgatgacgccgcctatgaacgggtcgtcaatacgccgccgcgcggcctcggcgat
cgcaccctggatgtcgtgcgtcagaccgcccgcgaccgtcagctgacgctgtggcagtcg
agccgggcgctgctcgcggagcgcgtgctggccggtcgcgccgccgccgcgctgcagcgg
tttctggagctgattgatgcgctggcggaagagacggcggagctgccgttgcatgtgcaa
accgatcgggtgatcaaaaactccggcctatggagcatgtacgagcaggaaaaaggtgaa
aagggccaggcgcgtatcgagaacctggaagagctggtcaccgctacccgccagtttagc
tacaacgatgaagatcaggatttgctgccgctgcaggcgttcctgtctcacgccgccctg
gaggccggcgagggccaggccgactcctatcaggacgcggtgcaattaatgacgctgcat
tccgccaaagggctagaattcccccaggtgttcattgtcggtatggaagagggaatgttc
cccagccagatgtcgctggacgaaggcgggcgcctagaagaagagcgccgcctggcgtat
gtcggcgtcacccgcgcgatggacaagctgaccattacctatgcggaaacccgccggctg
tatggcaaagaggcttaccaccggccgtcgcgctttgtcggcgaactgccgccggcgtgc
gtggaagaagtgcggctgcgcgccagcgtgacccgtccggccagccagcagcgcattggt
gcgccgttaagcgaaagcgatagcggtttcacccttggccagcgggttcgccatccgaaa
tttggtgagggtacggtagtcaatctggaaggcagcggcgaacatagccgtctgcaaatt
gcgtttcaaggccagggcatcaaatggctggtggttgcttacgcccgcctggaaaccgtt
tga
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