Shewanella glacialimarina: FJ709_00080
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Entry
FJ709_00080 CDS
T07885
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00071
Fatty acid degradation
sgla00280
Valine, leucine and isoleucine degradation
sgla00310
Lysine degradation
sgla00362
Benzoate degradation
sgla00380
Tryptophan metabolism
sgla00410
beta-Alanine metabolism
sgla00640
Propanoate metabolism
sgla00650
Butanoate metabolism
sgla00907
Pinene, camphor and geraniol degradation
sgla00930
Caprolactam degradation
sgla01100
Metabolic pathways
sgla01110
Biosynthesis of secondary metabolites
sgla01120
Microbial metabolism in diverse environments
sgla01200
Carbon metabolism
sgla01212
Fatty acid metabolism
Module
sgla_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FJ709_00080 (fadB)
00650 Butanoate metabolism
FJ709_00080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FJ709_00080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FJ709_00080 (fadB)
00310 Lysine degradation
FJ709_00080 (fadB)
00380 Tryptophan metabolism
FJ709_00080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FJ709_00080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FJ709_00080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FJ709_00080 (fadB)
00930 Caprolactam degradation
FJ709_00080 (fadB)
Enzymes [BR:
sgla01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FJ709_00080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FJ709_00080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FJ709_00080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FJ709_00080 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UCX03065
LinkDB
All DBs
Position
complement(22457..24607)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQSTDIKALILTSA
KSTFIVGADITEFLELFKQDDATLLAWVEQANAVFNKLEDLPFPTVSAINGFALGGGCET
VLATDLRVADTNALIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITSGKEQRPDDALK
VGAIDAVVAPENLHTAAIQMLHDALAGNLDWQARRKQKQSPLLLGKLEAMMSFATAKGMV
FSIAGKHYPAPMAAVNVIEKAATLDRAGALQVEAQAFIKLAKTDVATALIGIFLNDQLVK
GKAKKASKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYASIKNSDIVVEAVVEHPKVKATVLAEVEGYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNTKGFYAYSVDRRGKP
KKDIDQTSYELLSAEFGTLKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYKVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccatccaggttgagttacttgaagacaatattgccaagctg
tgctttaacgcaccgggctcggtaaacaaatttgacagagaaactctagcctctttagat
gctgcactagatagcatcaagcaaagtactgatataaaagcattaatacttacttcagct
aaaagcacatttattgtgggcgctgatatcactgagtttttagagttatttaagcaagac
gatgccacactacttgcttgggttgaacaagccaatgcggtattcaataagcttgaagat
ttacctttccctacggtatcagctattaatggttttgctttaggcggtggatgtgaaacg
gttctagcaacggacttacgtgtagcggataccaacgcacttattggtttgcctgaaaca
aaattaggcttaattcctggctttggtggtacggttcgcctacctcgcgtaatcggtgct
gacaatgctttagagtggatcacatcaggtaaagaacaacgtcctgacgatgcgcttaaa
gtcggtgcaattgatgcggtagtggctccagaaaacctacacacagcagcaattcaaatg
ttacatgacgcattagcgggcaacttagattggcaagctcgtcgtaagcaaaagcaatca
ccgctgctactaggtaagcttgaggctatgatgtcgttcgccacagccaaaggcatggtg
ttctctattgccggtaaacattatccagcgccaatggctgctgtgaatgttatcgaaaaa
gcggcgactttagatcgcgctggtgcattgcaagttgaagctcaggcttttattaagctt
gctaaaacagacgttgcgacagcattgattggtattttcttaaatgaccaacttgttaaa
ggcaaagcgaagaaagccagcaaattagctaaagatgttaaccaagctgctgtattgggt
gcaggtattatgggcggcggtattgcttaccaaagcgccagcaaaggcacaccgattgtc
atgaaagacatcgctcagccagcattagagttaggcttgaacgaagcggctaaaattctg
acaacacaagttgcacgcggtcgctctacgccagaaaaaatggctaaagtattaaacaac
atcacaccttctctagattatgcctctatcaaaaatagcgacatcgttgtagaggcggtt
gttgaacatccaaaagttaaggccactgtactggcagaagttgaaggctatgtatctgaa
gatgcgattattgcttcaaatacatcaacaatctctattaacttactggctaaaagcctt
aagaaacctgaacgcttctgcggcatgcacttctttaaccctgtgcacaaaatgccatta
gttgaaattatccgtggtgagcacagctcagaagaaaccatcgcaactgtcgttgcttac
gccagcaaaatgggtaaaaccccgattgttgttaacgattgccctggcttcttcgttaac
cgcgtattgttcccatactttgcaggttttagcggactactagctgatggtgctgacttt
gccgctgtcgataaagttatggaaaaacagttcggctggccaatgggtccagcttactta
cttgacgtagtcggtttagatacaggtcatcacgcacaagcagtaatggctgaaggtttt
cctgatcgcatgggtaaaaatggcaaagatgccatcgacattatgttcgaaaataagcgt
ctaggtcagaaaaacactaaaggtttttatgcttactcggttgaccgtcgtggtaaacca
aagaaagacattgaccaaacaagctatgaattattaagcgctgagttcggtacattaaaa
gcattcgagtcagatgacatcatagctcgctgtatgatcccgatgataattgaaacagtt
cgctgtttagaagaaggcattattgcatcaccagctgaaggcgacatgggtctagtatac
ggtattggttttccaccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatacgcacatcttggtggcttatataaagttacc
gatgcaatgcgcgcacttgcagccaacaacggtagttactaccaagcctaa
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