Shewanella glacialimarina: FJ709_00315
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Entry
FJ709_00315 CDS
T07885
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00630
Glyoxylate and dicarboxylate metabolism
sgla00680
Methane metabolism
sgla01100
Metabolic pathways
sgla01120
Microbial metabolism in diverse environments
sgla01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FJ709_00315
09102 Energy metabolism
00680 Methane metabolism
FJ709_00315
Enzymes [BR:
sgla01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FJ709_00315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UCX03106
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Position
75723..78572
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AA seq
949 aa
AA seq
DB search
MRLTRKSDTVAKAEKPGLGLNRRQFLKSASLATGGIAAASMLGAGMMRKAEAKDVPHNAP
TEVVRTICSHCSVGCGVYAEVQNGVWTGQEPAFDHPFNQGGHCAKGAALREHGHGEKRLK
YPMKLEGGKWKRLSWEQAIEEVGQKALDIRAESGPDSIYFMGSAKFSNEQAYLYRKFAAM
WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDIRNSKCMMFIGSNPCEAHPVAMQH
ILIGKERGAKIIVVDPRFTRTAAKSDEFVHIRPGTDIPFIYGLLWHIFENGWQDESFISQ
RVYGMERIKEEVKKYPPEEVEHVVGVPKAQMYRVAKMMAETKPGTIVWCMGGTQHHIGNA
NTRAYCILQLALGNMGVEGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTSGAWDHWAG
VWDLEPTWVKDRFDQGEYLGQSPQTSAGIPCSRWHDGVLEDKTKIAQKDNIRLAFFWGQS
VNTETRGREVREALNKMDTVVVVDPFPTMAGVMHQRQDGVYLLPASTQFETYGSVSASNR
SLQWRDKVIEPLFESLPDHVIMYKLAKKWGVAEQFCKHIEVKNDEPVIEDVTREFNKGMW
TIGYTGQSPERLKMHQKNWGTFDVDTLEAPGGPARGETYGLPWPCWGTPEQKHPGTQILY
RTGREVKDGGGNFRARYGVEHEGNNILAEGSFSKGAEIEDGYPEFTADMLKQLGWWDDLT
AEEKKLAEGKNWKTDLSGGIQRVAIKHGCIPYGNAKARCIVWNFPDDIPLHREPLYTPRR
DLVAKYPTYDDRMVARLPTLYKTIQDKDFAKDYPLALTSGRLVEYEGGGEETRSNPWLAE
LQQEMFIEISPADAADRGIRDGDDVFVHGPEGAKITVKAMVTPRVIEGECFMPYHFAGVF
EGESLEKNYPEGTVPYVIGESANTILTYGYDVVTQMQETKSSLCQISKA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacccgtaaatctgacacggtcgcaaaagctgaaaagccaggcctaggtctt
aacagacgtcagtttctcaagtcggccagtttggcgacaggtggaattgcagcagcgtcg
atgttaggtgccggcatgatgcgtaaagctgaagccaaagatgtaccacataacgcgcca
actgaggtcgtacgtaccatttgttctcactgttcagtgggttgtggtgtctatgctgaa
gttcaaaatggggtgtggactggtcaagaaccagcatttgatcatccatttaatcaaggt
ggtcactgtgctaaaggtgctgcattacgtgagcacggacacggtgagaaacgacttaaa
tatccaatgaagctggaaggtggaaaatggaagcgtttatcgtgggagcaagccattgaa
gaagttggccagaaagcactcgatatacgtgctgaatcaggtccagattctatttacttc
atgggtagcgcgaaattttcgaacgagcaagcttatttatatcgcaaattcgcggcaatg
tggggcactaataatgtcgatcactctgcacgtatttgtcactctaccacggtagccggt
gttgcaaacacttggggctacggtgcgcaaacaaactcgtttaacgatatccgtaactca
aaatgcatgatgtttatcggctcaaacccatgtgaagcgcatccagttgcgatgcagcac
atattaattggtaaagagcgcggtgcaaaaatcattgttgttgatccacgctttacccgc
actgcggctaaatctgatgaatttgttcatattcgtccaggtactgacattccatttata
tatggtttgctatggcacatcttcgaaaacggttggcaagatgaaagcttcatctctcaa
cgtgtatacggtatggaacgtatcaaagaagaagtgaaaaagtacccgccagaagaagtt
gagcatgttgttggtgtaccaaaagcacaaatgtaccgtgtggctaaaatgatggctgaa
accaagcctggtactattgtttggtgtatgggaggtactcagcatcatattggtaatgcc
aacacgcgcgcatattgtattcttcaattagccctaggtaatatgggtgttgaaggcggc
ggaactaacattttccgtggtcacgataacgtacagggtgcgactgactttggtttgcta
tttgataacttaccgggatattacggcttaacctctggcgcatgggatcactgggcaggt
gtatgggatcttgagccaacttgggtcaaggaccgttttgaccaaggtgaatacttaggt
caatcgccacaaacatcagcaggtattccttgttcgcgttggcacgatggtgtgttagaa
gataaaaccaaaattgcccaaaaagacaatattcgtctggcatttttctggggacagtct
gttaatacagaaactcgcggccgtgaagtgcgtgaagcattaaacaagatggataccgtg
gttgttgtcgatccattcccaactatggcgggtgtcatgcaccaacgtcaagatggggta
tatctattacccgcgtctactcagtttgaaacctacggttcagtatctgcttcaaaccgt
tcattacagtggcgagacaaagtgattgagccattatttgagtcattacctgatcacgtg
atcatgtataaattggccaaaaaatggggcgttgctgagcagttctgtaagcacattgaa
gtgaaaaatgatgagcctgttattgaagacgtgactcgcgaatttaacaaaggtatgtgg
accattggttatactggccaaagcccagagcgtttgaaaatgcaccagaaaaactggggt
acatttgatgttgatacactagaagcacctggtggtcctgcgcgcggtgaaacctacggc
ctgccttggccttgctgggggacacctgaacagaaacatcctggtacgcaaattttgtac
cgcacaggacgtgaagtgaaagacggtggtggtaacttccgtgcccgttatggtgttgaa
catgaaggcaataatattcttgctgaaggttcattctctaaaggtgctgaaattgaagac
ggttacccagagtttaccgccgacatgcttaaacagcttggttggtgggatgacttaacc
gcagaagagaaaaagcttgctgaaggaaaaaactggaaaacagatctttctggtggtatc
caacgagtagcaatcaaacatggttgtatcccttatggtaatgcgaaagctcgttgtatt
gtgtggaattttccagacgatattccgttacatcgtgaacccttatatacccctcgtcgt
gatttggtggctaagtaccccacctatgatgatcgtatggttgcacgcctgccaaccctt
tataaaacaattcaagacaaagactttgctaaagactatccattagctctgacctctggt
cgtttggttgaatatgagggtggcggtgaagaaacccgttcaaacccatggcttgctgaa
ttacagcaagaaatgttcatcgaaatcagccctgctgatgcagccgatcgcggtattcgt
gatggtgatgatgtgtttgttcacggaccagaaggcgcgaaaatcaccgttaaagcaatg
gtgacccctcgtgtgattgaaggcgaatgtttcatgccttatcactttgctggtgtgttt
gaaggcgaaagcctagagaaaaactatccagaaggcacagtgccttacgtgataggtgaa
tcagcaaacactattttaacttatggctatgacgttgtgactcagatgcaagaaactaag
tccagtttatgtcagataagcaaagcctaa
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