Shewanella glacialimarina: FJ709_01045
Help
Entry
FJ709_01045 CDS
T07885
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
FJ709_01045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
RNase_II_C_S1
T2SSK
HHH_6
Phage_sheath_domII
Motif
Other DBs
NCBI-ProteinID:
UCX03229
LinkDB
All DBs
Position
250371..252734
Genome browser
AA seq
787 aa
AA seq
DB search
MHNIAQIIAQELNVRQQQVDATIALLNDGATVPFIARYRKEATGGLDDTQLRQLYSRLGY
LTEMSDRRQVILSSIDAQGKLTPALKYAIDEADSKTRLEDLYLPYKPKRRTKGQIAIEAG
IEPLVDILLADRSADADAKAAEFINSEAGFADAKAVLDGARFILMERFAEDADLVLKIRN
HLAQQAVFESKVVKGKEKEGAKFRDYFEQSERITKVPSHRALAMLRGRNEGILSLSMNAD
PDTEAKQGSYCEVIIADHFKLKLTDSSVDQWLKTVVTSTWRIKIALQMETEFITKMRESA
EEEAIKVFARNLGDLLMASPAGAKATMGLDPGIRTGVKVAIVDNTGKLVAHTTVFPHAPQ
NLWDKSIKTLSNLVGMHKVDIIAIGNGTGSRETDKLAGELIAAVKESRPTLTKVMVSEAG
ASIYSASEFAANEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQSQL
SQSLEAVVEDCVNSVGVDLNMASAPLLAQVAGLNKTLAKNVVDYRDEHGQFTNRKQLLKV
ARLGPKAYEQAAGFLRIRNGDNPLDGSAVHPEAYSIVESIAAASKHDVAQLIGNGELLKG
VKAELFVTESFGLPTITDILAELDKPGRDPRGEFKTANFKDGVEALNDLKVDMILEGVVT
NVTNFGAFVDVGVHQDGLVHISSLTDKFVSDPHTIVKAGDVVKVKVMEVDIERRRVSLSM
RLDEIPQPANTDGKPQFIGQPGKGKPAHNKGQKPAHAGRNVTPPKVKVPANAAMGNAFAD
ALAKMKK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcataatattgcccaaataattgcccaagaattgaatgttcgccaacaacaagtcgat
gccactatcgccttgcttaatgatggtgccacagtgccctttattgctcgttaccgtaaa
gaagctaccggcgggttagatgatactcagttacggcagctttactcccgtttagggtat
ctaaccgagatgagcgaccgacgtcaggtaattttgtctagcatcgacgcacagggtaag
ttaactccagcgttaaagtatgcaatcgatgaagccgacagcaaaactcgccttgaagat
ttatatttgccttataaacctaagcgtcgtactaaagggcaaatagccattgaagctggc
attgagccattggtcgatatattgcttgccgatcgcagcgcagatgctgacgctaaagcc
gccgaatttattaactctgaagccggttttgcagatgcaaaagctgtgctggatggcgca
cgttttattttgatggaacgctttgccgaagatgctgatctggtccttaaaattcgtaac
catttagcccaacaggctgtgtttgaaagcaaagtggttaaaggcaaagaaaaagaaggc
gctaagttccgcgattactttgaacaaagtgaaagaatcactaaagtgccatcacatcgc
gccttagctatgcttcgtggccgcaatgaaggtattttaagtttaagcatgaatgccgac
cctgatactgaagccaaacaaggcagttattgtgaagtaattattgccgaccatttcaag
cttaaactcacagattcaagtgtcgatcaatggttaaaaaccgttgttacctcgacgtgg
cgcattaaaattgcgttacaaatggaaactgaatttattactaaaatgcgtgaaagcgcc
gaagaagaagcgattaaagtctttgcccgcaacttgggtgatttgcttatggcttcgcct
gcgggcgcaaaagcgactatggggctagaccctggtattcgtaccggtgtgaaggttgct
attgttgataacaccggcaagttagttgcccatacaacggttttcccgcatgcgccacaa
aatctgtgggacaaatcaataaagacattatccaatctggttggtatgcataaagtggac
attatcgcgataggtaatggcactggctcgcgtgaaaccgacaagctggcaggtgagtta
attgcggcggtaaaagaaagccgtccaactctaactaaagtcatggtcagtgaagcgggt
gcttctatttactcggcttccgaatttgccgccaatgaatttcccgatttagatgtgtcg
attcgaggcgcggtgtcaattgcgcgtcgtttacaagacccattagccgagctagttaaa
attgaacctaaagccattggtgtagggcaatatcaacatgatgttagccaaagccagtta
tcgcaatcgcttgaagctgtggttgaagactgtgtgaacagtgtgggtgttgatttaaat
atggcctctgcgccgttattggcacaagtggctgggctgaataaaaccttagcgaaaaac
gtggttgattaccgtgatgaacatggccaattcactaaccgtaagcaattattgaaagtg
gcgcgtttagggccgaaagcttatgagcaagccgcaggatttttacgcattcgcaatggt
gataatccacttgatggttcagcagtgcatcccgaagcgtattcaattgttgagtctatt
gccgccgcgtcgaaacatgatgttgcccaattgattggtaatggcgagttattaaagggc
gtgaaagctgagctgtttgtcactgaatcatttggtttaccgaccattaccgatattttg
gctgagttagataaacccgggcgagatccgcgtggtgagtttaaaacagccaactttaaa
gacggtgttgaagcgcttaacgatttaaaagtggacatgatccttgaaggcgttgtgact
aatgtgactaattttggtgcctttgttgatgtgggtgttcatcaggatggtttagtgcat
atatcgtcgctaaccgacaagtttgtcagtgatccgcataccatagtgaaagcgggtgac
gtggttaaagtcaaagtgatggaagtggatattgagcgccgccgagtcagcttaagcatg
cgccttgatgaaataccgcaaccggctaatacagacggcaagccacaatttattggtcag
cctggcaagggtaaacctgctcataataaaggccaaaaacctgcgcatgctggtagaaat
gttacaccgccaaaagttaaagtgccggctaatgccgctatgggtaatgcgttcgcggat
gctttggctaaaatgaaaaagtaa
DBGET
integrated database retrieval system
