Shewanella glacialimarina: FJ709_01930
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Entry
FJ709_01930 CDS
T07885
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgla03009
]
FJ709_01930 (rimO)
Enzymes [BR:
sgla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FJ709_01930 (rimO)
Ribosome biogenesis [BR:
sgla03009
]
Prokaryotic type
ribosomal protein modification factors
FJ709_01930 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UCX03383
LinkDB
All DBs
Position
complement(461240..462667)
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AA seq
475 aa
AA seq
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MTVNHYDPKQTTTLATPKKVIEEQAKSALSLNSPIQASAAKIGFVSLGCPKNLVDSERIL
TQLRTEGYDVVSTYADADMVIVNTCGFIDSAVQESLDTIGEALAANGKVLVTGCLGVKKD
EIIELHPNVLGVTGPHAYDEVLKQVHQHVEKPKHNPLIDLVPDHGIKLTPKHYAYLKISE
GCNHRCTFCIIPSMRGDLDSRPIGDVLGEAQRLVKAGVKELLIISQDTSAYGVDVKHKTA
FWDGMPIKTHMQQLCEELAKQGVWVRLHYVYPYPHVDDIIPLMAQGSILPYLDIPFQHAN
KRILKLMKRPGSSDKVLERIAKWREICPELVIRSTFIVGFPGETEEEFEELLDFLEEAQL
DRVGCFKYSPVKGAKANDLPDHVPDEVMEDRLQRFMALQAQISADKLQARIGQEYLILID
EVNTEGAIGRSYMDAPEIDGKVYLTDEFDVQPGDQIWVQIIHADEHDVWGVRVED
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaatcactatgaccctaaacaaaccactaccctagcgacacccaagaaggtc
atagaggaacaagcaaaatcagcattaagcctaaatagcccaatacaagctagcgcggct
aaaattggttttgtcagtcttggctgtccaaaaaaccttgtcgattcagaacgtattctt
acccagctacgtacagaaggctatgacgtagtctctacttatgccgatgctgacatggtt
atcgttaatacctgtggctttattgacagtgcggtacaagaatctttagacactatcggc
gaagcattagcagctaatggtaaagtactggtaacaggttgcttaggggttaagaaagat
gaaattattgagctacaccctaacgtactaggcgtaaccggcccacatgcgtatgacgaa
gtacttaaacaggttcatcagcatgttgaaaaaccaaaacacaatccattaatcgattta
gtgccagatcatggtattaaactgacccctaaacattacgcctatttaaaaatatcagag
ggttgtaaccaccgttgtactttctgtattatcccttcaatgcgcggtgatttagactct
cgtcccattggtgatgtgttaggtgaagcgcagcgtttagtcaaagctggcgttaaagaa
ttattgattatttcacaagacacctcagcctatggtgtcgatgtaaaacataaaacggca
ttttgggacggcatgccaatcaaaacccatatgcagcagctttgtgaagaattagccaaa
caaggtgtttgggtgcgtttacactatgtttacccttatccgcatgtggatgacattatt
ccattaatggcgcaaggcagcattttaccgtatttggacattccgtttcagcatgccaat
aaacgcatccttaaattgatgaaacgcccaggcagctcagacaaagtgttagaacgcatt
gctaaatggcgcgagatttgcccagaattagtgattcgttcaacttttattgttggtttt
ccaggtgaaaccgaagaagagtttgaagaattattagactttttagaagaagcacaactt
gatcgcgtaggttgttttaaatactcgccagtaaaaggtgctaaagccaacgacttacca
gaccatgtgcctgatgaagtaatggaagacagattacaacgttttatggcattacaagca
caaatcagtgccgacaagctgcaagcgcgtattggtcaagagtatttaatcttaattgac
gaagtgaacaccgaaggcgctattggccgctcatacatggacgcaccagaaattgacggt
aaagtgtatttaaccgacgagtttgatgtgcagcctggcgatcaaatttgggtgcaaatt
attcatgccgacgagcacgatgtgtggggcgtacgcgtagaagactaa
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