Shewanella glacialimarina: FJ709_02465
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Entry
FJ709_02465 CDS
T07885
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgla03032
]
FJ709_02465
03036 Chromosome and associated proteins [BR:
sgla03036
]
FJ709_02465
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_02465
DNA replication proteins [BR:
sgla03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FJ709_02465
Chromosome and associated proteins [BR:
sgla03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FJ709_02465
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FJ709_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
SSB
HU-CCDC81_euk_1
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
UCX03481
LinkDB
All DBs
Position
complement(612166..612438)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIAKIAENADLTKAEAGRALKSFEAAVTEAMKNGEKISIVGFGSFETSQRAARTG
RNPQTGKEIQIAAATVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaactgattgcaaaaattgctgaaaacgcagatctaactaaagcagaa
gctggccgtgcattaaaatcatttgaagcagcggtaactgaagcgatgaaaaatggcgaa
aaaatttctatcgttggttttggatcatttgaaacctcacaacgtgctgcacgtactggt
cgcaacccgcaaactggtaaagaaattcaaattgccgctgcaactgtacctaagttcaaa
gctggtaaaacgttaaaagatagcgttaactaa
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