Shewanella glacialimarina: FJ709_02525
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Entry
FJ709_02525 CDS
T07885
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_02525
Transporters [BR:
sgla02000
]
Other transporters
Pores ion channels [TC:
1
]
FJ709_02525
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
HIP1_clath_bdg
Spectrin_1st_PEPL
GNAT_acetyltran
Seryl_tRNA_N
Fzo_mitofusin
Motif
Other DBs
NCBI-ProteinID:
UCX06537
LinkDB
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Position
complement(621940..623586)
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AA seq
548 aa
AA seq
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MLITASFTLACILGTAGAHAQSPLNTEQIIEPAHQTSTDARDKIEALSSIIQGDIDLLPD
LKGEIKSITEYRIKTRVIELRNLIDNLVNASKIDDEFVVPLVQSQLVFLKQVRHYLNADI
IQLRSQVDGGSGDNTILLKISEREFQRDHYLRAELETIIWAEKVKLDVETLKKTLTKRLI
TRADRLDSLVSYTQNELQKSVSEATAAGENISSEQKQRVSSLKERLAQNSASLSAAASLL
EQLGQDTTNIKQTLFSISGDITQDVLNFNVASSLLEEWANVAKHQALDNGPSVTFKIIVF
ILIIFISSLIAKIVTRITTKTVRASKLKFSKLLQEFFISLSSKAVFAIGLLVALSQLGFE
LGPLLAGFGIAGVIIGFALQDTLSNFASGMMILVYRPFDVGDLINAAGVTGRVSHMSLVS
TTIKTLDNQRLIIPNNKIWGDTINNITAEHQRRVDMTFGISYSDNIEHAETILKDIVQQH
PKVQATPEPIVKLHTLGESSVDFIVRPWVKPDDYWDVYWDINRAVKMRFDAEGISIPFPQ
RDVHIYQK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctcattactgccagttttactctagcttgtattttaggcactgctggcgcacatgct
caatcaccactcaataccgagcaaataatcgaacctgcccatcaaaccagtactgatgct
cgcgataaaattgaagcactctcgtccatcattcaaggtgatattgatttattgccagac
ttgaaaggtgaaattaaatcaattacagaatatcgcattaaaaccagagtgatagaactt
agaaacctgatcgataacttggttaatgccagtaaaattgatgatgaatttgtggttcca
ctagtacagtctcaattagtatttttaaagcaagtgcgtcactaccttaatgccgatatt
attcagcttcgcagtcaggtagatggtggcagcggtgataatactatcttattgaaaatt
tcagaacgcgagtttcaacgcgatcattaccttagagcagaattagaaacgattatctgg
gcagaaaaagtcaaactcgatgtcgaaaccttaaagaaaaccctaaccaaacgcttaata
acccgtgccgatagactagacagtttagtgtcttatacacagaatgagctacagaaatca
gtcagcgaagcgaccgctgcaggcgaaaacattagctcagagcaaaagcagcgcgtgagt
tcgctcaaagaaaggctagcacaaaatagcgccagcttatcggccgctgcatccctgtta
gaacaattaggtcaggacactactaacattaaacaaaccctatttagtatatcgggtgat
atcacccaggatgtgctgaattttaatgttgcatccagcttacttgaagaatgggcaaat
gttgctaaacatcaagctttagacaatggcccaagtgttacctttaaaatcattgttttt
atattaataatatttatcagcagtttaatagcaaaaatagtgaccagaattaccactaaa
actgtcagggcatctaagcttaaatttagtaaattattacaagaattctttatttcgtta
tcgagcaaagccgtgttcgccattggtttattggtcgccttatctcaactaggttttgag
ttaggccctttgctagcaggttttggtatcgctggtgtcattataggtttcgccttgcaa
gacaccttatctaactttgcatcgggaatgatgattttggtgtatcgcccttttgacgtt
ggtgatttaattaacgccgccggcgtaacaggaagagtcagccatatgagtctagtatcg
acaaccatcaaaaccctagataaccaacgtcttattattcctaataacaagatttggggc
gacactattaataatattaccgcagagcaccagcgacgtgtagatatgacatttggcatc
agttatagcgataatatcgagcatgcggaaacaattttaaaagatattgtacagcaacat
ccaaaagtgcaagcaacgcctgagcctatagtgaagttgcacactttaggcgagtcatct
gtcgactttatcgttagaccctgggtaaaacccgatgattattgggatgtttactgggat
atcaaccgcgcagtgaaaatgcgcttcgatgcggaaggaattagtattccgttcccacaa
cgcgatgtgcatatctatcagaaataa
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