Shewanella glacialimarina: FJ709_02885
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Entry
FJ709_02885 CDS
T07885
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgla03019
]
FJ709_02885
03009 Ribosome biogenesis [BR:
sgla03009
]
FJ709_02885
Messenger RNA biogenesis [BR:
sgla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FJ709_02885
Ribosome biogenesis [BR:
sgla03009
]
Eukaryotic type
Pre-60S particles
RNases
FJ709_02885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UCX03559
LinkDB
All DBs
Position
698954..699619
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AA seq
221 aa
AA seq
DB search
MSPYFIFGDIETGGLNGRLDNGELGMEYYPILELAFILTDKDLNQIGEPLRVVVHHSDEV
IATCNEWALDTHTASGLIDDVRASTVSLEQAELMVIDWLKGCGVTKYDFKSKQGVVFAGN
SIMFDRSYIMCQMPILHEYMHYRQLDVSAIALAARAFNPELERKATSAKLYKHEALADIR
ESIEELRVYKQVLGGDSQSAYERFSDACRVFAKSLIKGLMP
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttattttatatttggtgatatcgaaacaggtggcctgaatggccgcttagat
aatggcgagttgggtatggagtattacccaatccttgagctggcatttatcctgacagat
aaagacctgaatcaaataggtgagccgttacgtgtggttgttcatcacagtgatgaggtg
atcgcaacatgcaatgaatgggcattggatacgcacactgcaagcggcttgattgatgac
gttcgtgcatcaaccgtatcactcgagcaggcagagctaatggtgattgattggcttaaa
ggctgtggtgtgactaagtatgactttaagagcaagcaaggtgttgtgtttgctggtaat
tcaatcatgttcgaccgttcatacatcatgtgtcagatgccaatacttcacgagtacatg
cactatcgtcagttagatgtgtctgctattgcattagcagctcgggcgttcaatccagag
ttagagcgcaaggctacatcagcaaagctatacaagcatgaggcgttggctgatatacgt
gaatcaatcgaagagttgcgagtgtataagcaagtgttaggtggcgatagtcaaagcgct
tacgaacggttcagtgatgcgtgtcgtgtgttcgctaagtcattgattaaaggtctaatg
ccttga
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