Shewanella glacialimarina: FJ709_03335
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Entry
FJ709_03335 CDS
T07885
Name
(GenBank) porin
KO
K09476
outer membrane pore protein F
Organism
sgla
Shewanella glacialimarina
Pathway
sgla01501
beta-Lactam resistance
sgla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJ709_03335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FJ709_03335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_03335
01504 Antimicrobial resistance genes [BR:
sgla01504
]
FJ709_03335
Transporters [BR:
sgla02000
]
Other transporters
Pores ion channels [TC:
1
]
FJ709_03335
Antimicrobial resistance genes [BR:
sgla01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
FJ709_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
UCX03638
LinkDB
All DBs
Position
complement(798170..799381)
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AA seq
403 aa
AA seq
DB search
MKTTLLATALSALFIAPTVSAIEIYKDDKNAVEIGGFVDARIINTQGETEVVNGASRINF
GFDRQLTHGWNAFTKLEWGVNPVGNSDIVYNNRFESVQDEFFYNRLGYVGLEHDDYGTLT
IGKQWGAWYDVVYNTNYGFVWDGNAAGVYTYNKDDGAVNGVGRGDKTVQYRNAFGDFSFA
VQTQLKNSSFYTCDTSEEISQADCESLFQNGDKAAQQVDFNYTYGGSVTYSATDMLTFTA
GINRGEFDVQFGNGEQTTAIDLIYGAGVTWGNFDKDGLYAAANYNKQENHDTDNIGRLIK
DAYGVESLLSYKFENGLRPFISYNILNAGSNYVIQPNFNADPNDVFKRQFVVMGLHYVWD
TNTVLYVEGRKDFSDFTSADQEQEARMSLSEEDGIAIGIRYTL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacacttttagctaccgcgctttcagcactgtttatcgccccgacagtttca
gctatagaaatttacaaagatgataaaaatgctgtcgaaattggcggctttgttgatgca
cgtataattaatactcaaggtgaaactgaagtggttaatggtgcctcacgtattaacttt
ggttttgatcgtcaattaacccatggctggaatgcttttactaaattagagtggggtgta
aaccctgttggtaacagcgatattgtttataacaaccgctttgaatctgtccaagatgag
ttcttttataatcgtttaggttatgtcgggcttgagcatgacgactacggtacgctaacc
ataggtaagcaatggggtgcttggtacgatgtggtttataacactaactacggtttcgtt
tgggacggtaatgccgctggcgtatatacctataacaaagatgatggcgctgtaaacggt
gttggccgtggtgacaaaactgttcagtaccgtaatgcctttggtgatttcagctttgcc
gttcaaacgcagcttaaaaacagcagcttctatacttgtgatacaagcgaagaaattagc
caggctgattgtgaatcgctatttcaaaatggtgacaaagcagcgcagcaagttgacttt
aactacacctatggcggctctgtaacctatagcgcaactgacatgctaacatttaccgca
ggtattaaccgtggtgagtttgatgttcaatttggcaatggcgaacagacaaccgctatc
gatcttatttacggtgcaggtgtcacctggggcaactttgacaaggatggcctttatgct
gctgctaactataacaaacaagaaaaccatgacaccgataacataggtcgtttaatcaaa
gacgcctacggtgtcgaatcattgttatcatacaagtttgaaaacggtttacgcccattc
atatcgtataatattttaaatgccggcagtaactatgttattcaacctaactttaacgcc
gatccaaacgacgtgtttaagcgccagttcgtggtcatgggtttacactatgtatgggat
accaacacagtgttatatgttgaaggtcgcaaagatttcagtgactttactagcgccgat
caagaacaagaagccagaatgtcgctatcagaagaagatggtatcgccataggtattcgt
tacaccttgtaa
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