Shewanella glacialimarina: FJ709_04335
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Entry
FJ709_04335 CDS
T07885
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00541
Biosynthesis of various nucleotide sugars
sgla01100
Metabolic pathways
sgla01250
Biosynthesis of nucleotide sugars
Module
sgla_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FJ709_04335 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgla01005
]
FJ709_04335 (kdsA)
Enzymes [BR:
sgla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FJ709_04335 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sgla01005
]
Lipid A
FJ709_04335 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
UCX03803
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All DBs
Position
1016589..1017440
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AA seq
283 aa
AA seq
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MNQKIIELANGTEVANDKPFVLFGGMNVLESRDLAMSIAEHYVEVTQKLGIPYVFKASFD
KANRSSVHSYRGPGMEEGLKIFEEIKKTFNVPIITDVHEIYQCKPVAEVVDVIQLPAFLA
RQTDLVVAMAETGAIINVKKPQFLAPHEMRHIVKKFNEAGNDNILLCERGSCFGYNNLVV
DMLGMDEMKQSGYPVIFDATHALQRPGGRSDSAGGRRAQATELARSGMALGIAGLFIEAH
PDPDNAMCDGPCALPLHQLENYLKQIKAVDDLVKSFEYIDTSK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaaatcattgaattagctaatggcactgaagtggccaacgacaaaccattt
gtgttatttggtggtatgaatgtacttgaatcgcgtgatttagcgatgtcgatagctgaa
cattatgtcgaagtaacccaaaagttgggtattccttatgtgtttaaagcctcttttgat
aaagctaaccgttcatcagtgcattcatatcgcggtccgggtatggaagagggtttgaag
atttttgaagaaatcaaaaaaacctttaatgtgccaattattactgatgttcatgaaatc
taccaatgtaagcctgtagctgaagtggttgacgtgatccaattacctgcgtttttggct
cgtcaaacagacttagttgtcgcaatggctgaaaccggcgctatcattaatgtgaaaaaa
ccgcagtttcttgcgccgcatgaaatgcgtcatattgtgaaaaagtttaatgaagcgggc
aatgacaacattttattatgtgagcgcggcagttgttttggctataacaacctcgttgtc
gatatgctgggtatggatgaaatgaagcaatctggctacccagttatttttgatgccacc
catgctttgcaacgtcctggtgggcgcagtgattctgcaggtggacgccgtgcacaggca
actgaactcgcaagaagtggtatggcattaggcattgcgggtttatttattgaagcgcat
cctgatccagataatgccatgtgtgatggcccgtgtgctttaccattacatcaattagaa
aattatttgaaacaaatcaaagcggttgatgatctcgttaaatcgtttgaatatatagat
accagtaagtag
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