Shewanella glacialimarina: FJ709_04415
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Entry
FJ709_04415 CDS
T07885
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00061
Fatty acid biosynthesis
sgla00071
Fatty acid degradation
sgla01100
Metabolic pathways
sgla01212
Fatty acid metabolism
sgla02024
Quorum sensing
sgla04146
Peroxisome
Module
sgla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FJ709_04415
00071 Fatty acid degradation
FJ709_04415
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FJ709_04415
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ709_04415
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgla01004
]
FJ709_04415
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgla04147
]
FJ709_04415
Enzymes [BR:
sgla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FJ709_04415
Lipid biosynthesis proteins [BR:
sgla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FJ709_04415
Exosome [BR:
sgla04147
]
Exosomal proteins
Exosomal proteins of breast milk
FJ709_04415
Exosomal proteins of breast cancer cells
FJ709_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UCX03818
LinkDB
All DBs
Position
complement(1030445..1032043)
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AA seq
532 aa
AA seq
DB search
MAYDADSTLDLSCYKSIVDLIEQSCAKFGNKTAYACLGKNITFTEVEQLSRDFAAYLQNC
TNLKPGDRIAVQLPNITQFVIAAYGIIRGGFVIVNTNPLYTERELIHQYNDSGAKALVVL
SDLLPTLEKVVKSTTIEYVISTHALDMIAPQVQPQTAINNIEFNTLLAQGREHTFTPVKP
NQTDLIALQYTGGTTGLSKGAMLTHRNLLANSGQVKSRIASTMTEGEDIFVAPLPIYHIY
AFMVNLVLYFESGGCSVLIPNPRDIAGLINTMKAYPFTGFAGLNTLFIGLCHQPEFKALD
FSHMTITISGGTALTSAAANLWQQTTGCMISEGYGLSETSPVVSLNAPGHQRLGTIGKPV
LDTKIKILDINDNEVVIGTAGELAVSGPQVMSGYWNKPQETANVMTKDGYFKTGDIAIAT
EDGYHTIVDRKKDMIIVSGFNVYPNEVEDILSGHELVMECAVVGVEDERSGEAVKAVIVL
KDPDQDIEAAKESIKEYCRTQLTAYKVPRIIEFTGQLPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgatgctgactcaactctcgacctaagctgctacaaatctattgttgatttg
attgaacaaagctgcgccaaatttggtaataaaacagcatatgcttgcctaggcaaaaac
atcacctttaccgaggttgaacagctttcgcgtgactttgcagcatacttgcaaaactgc
acaaatttgaagccaggtgatcgtatcgctgtgcagttacctaatatcactcagtttgtc
attgcagcttacggtattattcggggggggtttgttatagtgaacactaacccactgtat
actgaacgagagttaattcatcaatataatgactctggcgctaaagctttagtggtatta
tcagacttactgcccacgttagaaaaggtggttaaatctactaccattgaatacgtcatc
tccacccacgcactggatatgatcgcgccacaagttcaaccccaaacggccatcaacaat
attgaatttaatacattattagctcaaggtcgcgagcacacattcaccccagtaaagcct
aaccaaacagacttaattgccttacaatacacaggcggcacaactggattatcaaaaggt
gccatgctaacccatcgcaatctgttggctaactcaggccaagttaagtcaagaattgcc
agcaccatgaccgaaggcgaagatatctttgttgcgccgttgccgatttatcatatctac
gcttttatggttaacctagtgctgtattttgaatcaggtgggtgctcagtgttaatccct
aatcctcgggacatagcaggattaatcaacaccatgaaagcttatccttttacaggattt
gctggccttaacaccttatttattggcttatgccaccagccagagtttaaagcgctcgat
tttagtcatatgaccattaccatttccggcggaacagcgctaacgagtgctgcagccaat
ttatggcaacagactaccggttgcatgatatctgagggttacggcttgtcagagacctct
ccagttgtcagtttaaatgcgccaggacatcaacgcttaggtactatcggaaaacctgtt
ttagacaccaaaattaaaatcttagacataaacgataacgaagttgttatcggcacagct
ggtgaactcgctgtaagtggccctcaggttatgtctgggtattggaataagccacaagaa
accgctaacgtaatgactaaagatggctatttcaaaacaggtgatatagcgatagcaaca
gaggatggttaccacaccattgttgatcgtaaaaaagacatgattattgtatccggtttt
aacgtctaccctaatgaggtggaagatatcctttcaggacatgaacttgtaatggaatgt
gcggttgttggtgtcgaggatgagcgttctggtgaagcggtaaaagccgttattgtgtta
aaagatccagatcaagatatagaagcggccaaagagtctattaaagaatattgccgaact
cagcttaccgcctataaagtaccccgtattattgagttcaccggccaattacctaaaagt
actgttggtaaaattttgcgcagagaattacgtaagtaa
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