Shewanella glacialimarina: FJ709_04445
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Entry
FJ709_04445 CDS
T07885
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJ709_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_04445
Enzymes [BR:
sgla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FJ709_04445
DNA repair and recombination proteins [BR:
sgla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FJ709_04445
Prokaryotic type
FJ709_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UCX03824
LinkDB
All DBs
Position
1037753..1038412
Genome browser
AA seq
219 aa
AA seq
DB search
MKSWPGFIKNEHQQDYFIRLNKFLSEQQSMNKVIFPPKADIYRAFELTPVEKVKVVVIGQ
DPYHGEGQAHGLAFSVKSGVKVPPSLVNIYKELAQDIPSFSIPSHGNLTHWAEQGLLLLN
TVLTVEQSLAHSHAKAGWEVFTDHVLDYLNSLPQPLIFVLWGSHAIKKGRLITHEHHTIL
SGPHPSPLSAYRGFFGCGHFSKINQQLIKNGLEPIDWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagttggcctggatttatcaaaaatgaacatcaacaggattactttattcggtta
aataaatttctgtctgagcagcagtcaatgaacaaagtcatctttcctccaaaggctgat
atttatcgtgcttttgaattaacgccggttgaaaaggtgaaagtggtggtgataggtcaa
gacccctatcatggcgaagggcaagcccatgggttagccttttctgttaaatcgggtgta
aaagtaccaccatccttagtcaatatttacaaagagctagcgcaagatataccgagtttt
tcgatcccatctcacggtaatttaacccattgggcagagcaaggcttgttattgttaaat
acggttttaacggtagaacaatctttggcgcattcacatgctaaagctgggtgggaagtg
tttacagatcatgtgttagattatcttaacagcttacctcagccactgatattcgtactg
tggggcagccatgctattaagaaggggcgtctaattacccatgaacatcatactatttta
agcggccctcatccgtcaccattatcggcatatcgtggtttttttggatgtggtcatttc
tccaaaataaatcaacagcttattaaaaatggcctcgaaccgattgattggcaggtataa
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