KEGG   Shewanella glacialimarina: FJ709_05450
Entry
FJ709_05450       CDS       T07885                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sgla  Shewanella glacialimarina
Pathway
sgla00521  Streptomycin biosynthesis
sgla00523  Polyketide sugar unit biosynthesis
sgla00525  Acarbose and validamycin biosynthesis
sgla00541  Biosynthesis of various nucleotide sugars
sgla01100  Metabolic pathways
sgla01110  Biosynthesis of secondary metabolites
sgla01250  Biosynthesis of nucleotide sugars
Module
sgla_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sgla00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FJ709_05450 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FJ709_05450 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FJ709_05450 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FJ709_05450 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FJ709_05450 (rfbB)
Enzymes [BR:sgla01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FJ709_05450 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 Sacchrp_dh_NADP KR
Other DBs
NCBI-ProteinID: UCX06589
LinkDB
Position
1256694..1257776
AA seq 360 aa
MKILVTGGAGFIGSALVRFIIEHTQDEVVNVDKLTYAGNLASLQSVSNNPRYHFELVDIC
NRAELDRVFAEHQPDFIMHLAAESHVDRSITGPSDFIQTNIVGTFTLLETAREYWQTLVL
AKQNQFRFHHISTDEVFGDLPHPDDVCADQVAYLPKFTEQTSYAPSSPYAASKASSDHLV
RAWCRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNAIEGKDLPIYGKGDQIRDWLYVED
HARALYKVVTEGKVGETYNIGGHNEQRNIDVVKAICGILDALLPKETSYAEQITYVTDRP
GHDRRYAIDTTKISNELNWQPQETFATGLRKTIEWYLTHQTWCQHVQDGRYQGERLGLNS
NT seq 1083 nt   +upstreamnt  +downstreamnt
ttgaagattttagtgacgggtggagcaggttttattggctcggccttagtgcgttttata
attgagcatacccaagatgaagtcgttaatgttgataaactcacctatgcgggtaactta
gcgtctttacaatctgtgagtaataacccgcgttatcattttgagctggtcgacatttgt
aatcgtgctgagttagatcgtgtttttgctgaacatcagcctgattttattatgcattta
gccgctgaaagtcatgttgaccgttcaattactggacccagtgattttattcaaaccaat
attgtcggcacttttacgttgttggagacagcgcgtgaatactggcaaacactcgtcctt
gctaaacagaatcaatttcgttttcaccatatttctaccgatgaagtgtttggtgactta
cctcatcctgatgatgtgtgtgctgatcaagttgcctatttacctaaattcactgaacaa
acatcttatgcacccagtagtccttatgcagcatcaaaagcatccagtgatcatttagtt
cgtgcatggtgccgaacatatggcttgccaacgattgtgagtaattgttcgaataattat
ggtccttaccactttcctgagaagttaattccactggttattttaaatgcaatagagggc
aaagatttaccgatttatggtaaaggcgatcaaattcgtgattggttatatgtcgaagac
cacgctagggcactgtataaagtggtgactgaaggtaaggtgggtgagacctacaatatt
ggtggccataatgagcaacgcaatatcgatgtagtgaaggctatttgtggtattttagat
gctcttttgcctaaagagacttcttacgctgaacaaattacttatgtcacagacagaccc
ggtcatgaccgtcgttatgctattgataccaccaaaataagcaatgaattgaactggcaa
ccacaagaaacctttgcaacaggtttacgtaaaaccatcgagtggtatttaactcaccaa
acctggtgtcaacatgtgcaagatggtcgttatcaaggtgagcgtttaggccttaattct
tga

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