Shewanella glacialimarina: FJ709_05475
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Entry
FJ709_05475 CDS
T07885
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sgla
Shewanella glacialimarina
Pathway
sgla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FJ709_05475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_05475
Transporters [BR:
sgla02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FJ709_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_21
LiaI-LiaF-TM_PspC
AAA_7
AAA_16
Septin
Motif
Other DBs
NCBI-ProteinID:
UCX04006
LinkDB
All DBs
Position
complement(1261737..1263566)
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AA seq
609 aa
AA seq
DB search
MFKFFESLVQPLPPEEPTQPPKSLYAFCRHYTKGFGAPLIAMSVLTALLAMLEVSLFGFM
GQLVDWLVTKNPQTLWQDEGDTLITMSVIVLVVIPFLVWLHASIVYQTLLGNYPMAIRWM
AHRYLLKQSISFYQDDFAGRVATKVMQTALAVRETVMKLLDVLVYILVYFTSMLVMIASA
DLRLMLPMLIWLAAYVAIQWKLVPKLKAIATEQADARSTMTGRIVDSYTNIATVKLFSHT
QQETDYAKDSMMIFLKTVYGQMRLVTVINVSVQIINYILAFTITAVSIWLWADDAITVGA
IAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKSILIEDKVDAKPLNVSRGQ
IDFNQVSFHYGEKTGVIEGLDLHIKAGEKVGLVGRSGAGKSTLVNLLMRFHDIEKGEILI
DQQGLKDVTQDSLRAHIGMVTQDTSLLHRSIRENVLYGDPNASEAQLVAAIQQAQATEFI
AALTDPHGNVGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEVEAA
IQESLYELMEGKTVIAIAHRLSTIAAMDRLIVLDKGKIVEQGSHQELIASGGIYSQLWAH
QTGGFLGLD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattttttgaatcactcgtacaacctttgccacccgaagaaccgactcaacca
cccaaaagcttatatgctttttgccgtcattataccaaagggttcggcgcgccattgatt
gcgatgtcggtgctaaccgctcttttggcgatgctagaagtgtccctttttggctttatg
ggacaattggttgattggttggtgacgaaaaatccccagacattatggcaagatgaaggt
gacacgttaatcaccatgtcggttatcgtgttagtcgttattccctttctagtttggcta
catgcatcaattgtttatcaaaccttgttaggtaattaccctatggctatccggtggatg
gcacaccgttatttactgaaacaaagtatctcgttctatcaagatgattttgcagggcgc
gtggccaccaaagtcatgcaaacagcccttgcagtacgtgaaaccgtgatgaaactactc
gatgtattggtatacattttagtctacttcacctcaatgttagtcatgattgccagcgca
gacttacgcctaatgctgccgatgctaatttggttagcggcttatgtggctatccaatgg
aaattagtaccaaaacttaaagctatagcaacagagcaagccgacgcacgttcaaccatg
acagggcgaattgttgacagctataccaatatagccaccgtaaaactgttttctcatacc
caacaagaaaccgattacgccaaagacagcatgatgatttttttaaaaaccgtttacggc
caaatgcgtctggtcaccgtgattaacgtatcagtacaaatcatcaactacatcttagcc
ttcactattactgcggtatctatttggttatgggcggacgatgccatcacagtcggcgct
atcgctattgcggttagcttagcactgcgactcaatggcatgtcacaatggataatgtgg
gaaatcagttcattatttgaaaatattggcacagtgacagatggaatgaatactttatct
aagtctattttgattgaagataaagtcgatgccaaaccactcaatgttagccgagggcaa
attgacttcaatcaggtaagctttcattacggtgaaaaaactggcgtgattgaagggcta
gacttgcacattaaagccggtgaaaaagtcggattagtaggacgttcaggcgcaggtaaa
tctaccctagtgaatttattaatgcgttttcatgacatcgaaaaaggtgagattttaatt
gatcaacaaggattaaaagatgtcacccaggactcattacgcgctcatatcggcatggtg
acacaggacacatcgctattgcaccgctccattcgtgaaaacgttctttatggtgaccct
aatgccagcgaagcacaattagttgcagcgattcaacaggcacaagctaccgagtttatt
gccgcattaacagacccacatggcaatgtcggcctggatgctcaagttggtgaacgtggt
gtaaaactgtcaggcggacaacgccaacgtatcgccattgcccgggtattgcttaaaaac
gcccctattttgctgttagatgaagccacatcagcactcgactctgaagttgaagcggcg
attcaagaatcattatatgaattaatggaaggtaaaaccgttatcgccatcgcccatcga
ctatcaaccatagccgcgatggacaggttaatcgtattagacaaaggcaaaatagttgag
caaggtagccaccaagaacttatcgccagtggcggtatttatagccagctatgggcacat
caaacaggagggtttttagggctagattaa
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