Shewanella glacialimarina: FJ709_06420
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Entry
FJ709_06420 CDS
T07885
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgla03000
]
FJ709_06420 (pspF)
Transcription factors [BR:
sgla03000
]
Prokaryotic type
Other transcription factors
Others
FJ709_06420 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
Mg_chelatase
bpMoxR
AAA
AAA_16
HTH_28
HTH_23
AAA_7
Mga
HTH_Tnp_ISL3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UCX04169
LinkDB
All DBs
Position
complement(1492042..1493160)
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AA seq
372 aa
AA seq
DB search
MNKQFQQDNLIGQSNALLEVLEHVSKIAPLSKPVLIIGERGTGKELIAERLHYLSGRWDQ
SFIKLNCSSLSENLLESELFGHESGAFTGAKGKHEGRFERADGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGSKTVQTDVRLICAANEDLPSLAESGEFRADLLDRLAFDVITLPP
LRCRTEDIMNLAEYFAISMARQLKLEYFGGFSPLAVEQLLSYTWPGNIRELKNVVERSVY
REGSEGQQIDHIILDPFASPYRPQTRVKTKERQQAFIQPVISNNADETHTESLGAEVSTS
MQASPSQSNQEQTTQLPPINFPIDFKEYTEKQEVTLLQLALAESQFNQKKTAENLGLSYH
QLRGILKKYNLL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagcaatttcagcaagataaccttattggtcaatccaatgcattactcgaagta
ttagagcatgtctcgaaaatagcccctttgtcaaagcctgtgcttattattggtgaacga
ggcacgggtaaagagctaatcgcagagcggctacattatctttccggtaggtgggatcag
agttttataaaactcaattgctcttctttaagtgaaaacttactcgaaagcgaacttttt
ggtcacgaatctggcgcatttaccggggcaaaaggaaagcacgagggacgttttgagcgg
gccgatggcggcaccttatttttagatgagttagcaaatacctctgggcttattcaagaa
aaattattgcgcgtgattgaatacggtgaatttgaacgagtgggtggcagtaaaacagta
caaaccgatgtgcgcttaatctgtgcagcaaatgaagatttaccttcactggctgaatcc
ggtgaatttagggcagacttattagaccgattagcatttgatgtgatcactttaccgccg
ctacgttgccgtacagaagatattatgaacttagcagaatactttgccatcagtatggcg
aggcaactcaaactagaatattttggcggttttagtcctttagctgttgaacaattatta
agttatacctggccgggtaatatacgagaacttaaaaacgtggttgaacgtagcgtatat
cgagaaggcagcgaggggcagcaaatagatcatattattcttgacccattcgcatctcct
tatagaccccaaactcgtgttaaaaccaaagagcgtcagcaggcatttattcaacctgtg
atttcaaataatgccgatgagacacacacagagtcgttgggggcagaagtaagtacttct
atgcaggcatcaccttcacagagcaatcaagagcaaacaacacaattacccccaatcaac
ttccctatcgattttaaagagtacacagaaaaacaagaagtcaccttattacaattagct
ttagctgaaagccagtttaatcagaagaaaaccgctgaaaatttaggcctcagctatcat
caattacgcggaattctaaaaaaatacaacttattgtga
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