Shewanella glacialimarina: FJ709_07315
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Entry
FJ709_07315 CDS
T07885
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_07315 (sbcD)
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJ709_07315 (sbcD)
Archaeal homologous recombinant proteins
FJ709_07315 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UCX04325
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All DBs
Position
1698354..1699646
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AA seq
430 aa
AA seq
DB search
MRIIHTSDWHLGQHFFGKNRAAEHQAFMAWLLLQIEQHQVDALIIAGDIFDTGTPPSYAR
TLYNQFIVQMQQSGCQLIILGGNHDSVSMLGESKELLACLNTLVIPGALSSPEEHVFVIN
NRQGLPGAIMCGLPFLRPRELIQSQVDESAKDKQLKLGNAIAQYYQASFEQAQSLQAQHE
ELTNEDLPIIATGHLTTVGASTSESVREIYIGSLDAFNANLFPPADYIALGHIHRPQKVA
KTEHIRYSGSPLALSFDELSKDNQSNKSVFLVQWQAEGPMQVEALNIPMFQPMQFIRGNL
AQIQQQIALFADSNDDNVSSAFDVSGSFKQTWLSIEVTEQDYLSDLQSRIVEMTQHKAVE
VLQLKRARANRKAAMQINQNETLSELSVKEVFQRRLMQEQFDDEAFKQRIMTKFDQLQQE
VELAQQAENK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacttcagattggcatttaggtcagcatttttttggaaaaaaccgc
gccgcagaacatcaagcttttatggcttggttactgctgcaaattgagcaacatcaggtt
gatgccttaattattgccggcgatatttttgataccggtacgccgccaagttatgccaga
accctttacaatcaatttattgtacaaatgcagcaatctggttgccagttgattatttta
ggtggcaaccatgattcagtttccatgctgggcgagtctaaagaactacttgcttgccta
aataccctagtgatccctggcgcattatcctcacctgaagagcatgtttttgtgattaac
aaccgtcaaggtctgccgggtgccattatgtgtggtcttccttttttgcgtcccagagag
ttaattcaaagccaggtagatgaaagtgcgaaagacaagcaattaaagcttggcaatgcc
atagcccaatattatcaagcaagctttgaacaagcacagagcctacaagcgcagcatgaa
gagctgacaaatgaagatttaccgattattgccactgggcatctaacgactgttggcgcg
agcacgtctgaatcggtgcgcgagatttatattggcagcttagatgcttttaatgccaac
ttatttccacctgcggactacatcgctttagggcatattcatcggcctcaaaaagtcgct
aaaactgagcatattcgttattcaggctcgccattagcattaagttttgatgagttatca
aaagataaccagtctaataaaagtgtgtttttagtgcagtggcaggcagaaggccctatg
caggttgaggcacttaatattcctatgttccaacctatgcagtttattcgtggcaacctt
gctcaaattcagcaacaaatagcattatttgctgacagtaatgacgataacgtgtctagc
gcttttgatgtttctggctcattcaaacaaacttggctaagtatcgaggtcactgaacaa
gattatttatctgacttacagtcaagaattgtcgaaatgactcaacataaagctgtcgaa
gtactgcaacttaaacgtgctcgtgctaaccgtaaagcggcaatgcaaattaatcaaaat
gaaaccctgtcagaattatcagtaaaagaggtttttcaacgccgactaatgcaggaacag
tttgatgatgaagcatttaaacaaaggataatgaccaagtttgaccaattacagcaagaa
gttgaattggcgcaacaagcggagaataaataa
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