KEGG   Shewanella glacialimarina: FJ709_07990
Entry
FJ709_07990       CDS       T07885                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
sgla  Shewanella glacialimarina
Pathway
sgla03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sgla00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FJ709_07990 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sgla02044]
    FJ709_07990 (tssH)
Secretion system [BR:sgla02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FJ709_07990 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 ClpB_D2-small AAA_5 AAA_22 nSTAND3 Sigma54_activat Zeta_toxin AAA_25 IstB_IS21 TniB AAA_7 ATPase_2 NACHT AAA_14 AAA_30 SLFN-g3_helicase SRP54 AAA_24 Hpr_kinase_C DUF815 Med14 Cyclin_N Clp_N Lipoprotein_20 DUF1993 ABC_tran_CTD
Other DBs
NCBI-ProteinID: UCX04444
LinkDB
Position
1863765..1866362
AA seq 865 aa
MSAMTLSKLVEKLNPVCRKSLESAASICHSRSQFTVEIEHWLIALLESESGDFDIINASF
SVHKDQLIAEVRQGLEKFKTGNSAAPSLSPHIVNLLRQSWLNTSIEFNDSEVRVAYIIYT
LLADDSLNSLISRSAKQLMKIDPAQLKHAWPQLARQSSEHRVSSADIEETQAAPSKTPNL
DQFTQDLTAQACLGKIDPILGRDNEIRQMIDILTRRRQNNPILTGEAGVGKTAVVEGLAL
KIAQKEVPDALLNLRIHVLDLALLQAGAGVKGEFENRLKALINEVKNAVKPIILFIDEAH
TMIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKFFEKDAALARRFQVVKIEEP
SPEQAIDMMRGLLPVMESHHKILVSDQALCAAVNLSHRYITGRQLPDKAVSLLDTACARV
AMSQASTPGAVEVIQRKIQQLETQIMILNREQKNGSDHNKVLSELVKKQKLFEKDLRPLV
EQWQSELETVKSIAALVTQIQNEPKEFANLVTQLSEYKQKLTSNKQPMVHWQVDDQLVAE
VISDWTGIPAGKMQDDEIKTILNLKDVMAKRVIGQDHALDLIAKTVQTSRAQLGDEKRPI
GVFLLAGPSGVGKTETALTLAEQVYGSEDNVTIINMSEFKEEHKVSLLLGSPPGYVGYGE
GGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGTIKDGEGRDVDFKNTIIIMTS
NAGTDTTMALFEDEDIAPSISGLRKALQDDLLAYFKPAFLGRLNVIPYIPLTQQMLNEIT
RLQLQRVGQRLVTHYQAKFSYSDDVVTKIVSMCQDAGSGARNVHNILQNTMLPDLSIKIL
QNMAVNKKTVNVKVNIEKEEFTYKV
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgtcagcaatgactctgagtaaattggtcgaaaaacttaatcctgtttgccgaaaatct
ttagaatctgccgccagtatttgccatagccgtagtcaatttacagttgaaattgaacat
tggttaatagcgttattagaaagcgaatcaggtgactttgatataattaatgccagcttc
tctgtccataaagatcagcttattgctgaagttcgtcaaggacttgaaaagtttaaaaca
ggaaacagtgccgcgccaagcttgtcgccgcatattgtaaacttacttcgacagtcttgg
ttaaataccagtatagagtttaatgatagcgaagttcgagttgcttatataatttatact
cttcttgcagatgattctcttaattcattaatttctcgctctgccaaacaattaatgaaa
attgatcctgcacaattaaaacacgcttggccgcaactagcccgtcaatcatcggagcat
agagtatcaagtgctgatattgaagaaacccaagcagcaccaagcaaaacacctaatcta
gaccagtttacccaagatcttactgcgcaagcgtgtttaggtaaaattgaccctattcta
ggtcgcgacaatgaaatcagacagatgattgatattttgactcgacgtcggcaaaacaat
ccaatcctaacgggagaggcgggagttgggaaaaccgcggttgttgaaggtttagcactt
aaaattgctcaaaaagaagtacctgatgcattacttaatttgagaattcatgtacttgac
ttagctttgttacaagctggagccggtgtcaaaggtgaatttgaaaatagactcaaagca
ttaatcaatgaagttaaaaatgctgtaaagccgattatattatttatcgatgaagcgcac
actatgatcggaagtggtggacaagctggacaaaacgatgccgcaaacttacttaagcca
gctttagcaagaggagagttaaggactatagccgccacaacatgggcagaatataagaag
ttttttgaaaaagatgcagcactagcccggcgttttcaagtcgtaaaaatagaagaacca
agccctgaacaggctatagatatgatgcgcggtttattacctgttatggaaagtcatcat
aagatcctcgtatcagatcaagcactttgtgctgcggtaaatctatcccatcgttatata
acagggcgccagttaccagataaagcggtgagcttattggatacagcctgtgccagagta
gcaatgagccaggcttcaactccgggtgctgttgaggtaatacaacgcaaaattcaacaa
ttagaaacacaaataatgatcttgaatagagagcagaaaaatggctcagatcacaataaa
gtactatccgaattagtcaaaaaacagaagttgtttgaaaaagaccttagaccgcttgta
gaacaatggcaatcagagctagaaacggtaaaaagtattgccgctttagtaacacaaatt
caaaatgagccaaaggaatttgctaatttagtcacccaactatcagaatacaagcaaaaa
cttacgagtaataaacagccaatggtgcattggcaagttgatgatcaactcgtggctgaa
gttatttcggattggacaggtattcctgctggtaaaatgcaagatgatgaaataaaaaca
attttaaatctaaaagatgtcatggcaaagcgagtaataggtcaagatcacgcattagat
ttaattgctaaaacggtgcaaacatcacgtgctcaactaggtgatgaaaaacgtccaatt
ggtgtgtttttattagcaggcccaagtggcgttggtaagacagaaacagcattaacttta
gccgaacaagtctatggcagtgaagataatgtgaccataatcaatatgtctgaatttaaa
gaagagcataaagtgtcgctcttattaggctcgcctccgggttatgttgggtatggtgaa
ggtggagtattaactgaagcagtacgacgtaaaccttacagtgtaattttacttgatgaa
atggagaaggcacacccaggagtgcaggatattttttatcaagtatttgataaagggaca
ataaaagacggtgaagggcgtgatgtcgattttaaaaacaccattattattatgacatct
aatgcgggaactgatactacaatggcgctatttgaagatgaagatatcgcaccgtcaata
agtggactacgaaaagcccttcaagatgacttattagcgtactttaaaccagcattttta
ggccgccttaatgttattccttatataccactaactcagcagatgcttaatgaaataact
agactgcaattacagcgagttggacaacgtttagttacccattaccaggctaaatttagt
tacagcgatgatgttgtcaccaagattgtgtctatgtgccaagatgccggttctggcgct
cgtaatgtgcacaatattttacaaaacaccatgctgccagatttatccattaagatttta
cagaatatggcagtaaataaaaaaacagtaaatgtaaaagtaaatatcgaaaaggaagag
tttacttataaggtataa

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