Shewanella glacialimarina: FJ709_08340
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Entry
FJ709_08340 CDS
T07885
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00541
Biosynthesis of various nucleotide sugars
sgla01100
Metabolic pathways
sgla01250
Biosynthesis of nucleotide sugars
Module
sgla_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FJ709_08340 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgla01005
]
FJ709_08340 (kdsB)
Enzymes [BR:
sgla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
FJ709_08340 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
sgla01005
]
Lipid A
FJ709_08340 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
UCX04505
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All DBs
Position
complement(1935855..1936592)
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AA seq
245 aa
AA seq
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MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLARGLDNIYVATDDVRIKDAVE
GFGGKVVMTSADAASGTDRINDAISQLGLADDDLVINLQGDQPLIDPISIEQIISLFERH
PGEFEMATLGFEITDKKELDDPMHVKMVFDNDFNALYFSRARIPFGRDTNDYPVYKHLGV
YAYTRRFVNAFAQLPLGKLEDLEKLEQLRALEYGYKIKIAISAFDSPEVDTPDDIRKCEL
RLAVD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttactctattaattccagctcgttatggttcaagccgttttcctggaaagcca
ttagcgccgattaatggtaaaccgatgatccaacacgtttacgaacgtgcctcattagcc
agaggattagacaatatttacgttgctactgatgatgtccgcattaaagatgccgttgaa
ggttttggtggtaaagtggttatgactagcgctgatgccgcatcgggtacagaccgtatt
aatgatgctatcagccagttaggcttagccgatgatgatttagtgattaacctacagggc
gatcaacccttaattgaccctatttcgattgaacaaatcattagcttatttgaacgccat
cctggtgaatttgaaatggcgaccttagggtttgaaatcaccgataagaaagaattagac
gacccaatgcacgttaaaatggtgttcgataatgacttcaacgcattgtatttctcacgc
gcacgcattccgtttggccgtgacactaacgactaccctgtctacaaacacttaggtgtt
tatgcttacacccgtcgttttgttaatgcctttgcccaattaccactaggtaagttagaa
gacctagaaaaattagagcaactgcgtgcattagaatacggctataaaataaaaatcgcg
attagcgcattcgattcaccagaagttgatacccctgatgatattcgtaaatgtgaatta
cgcttagcggttgattaa
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