Shewanella glacialimarina: FJ709_08440
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Entry
FJ709_08440 CDS
T07885
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
FJ709_08440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_3
HTH_23
HTH_28
HTH_29
rve_2
HTH_32
HTH_17
Xre-like-HTH
Med28
Motif
Other DBs
NCBI-ProteinID:
UCX04525
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All DBs
Position
complement(join(1959457..1960532,1960532..1960997))
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AA seq
513 aa
AA seq
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MNYQRHSGQFKEAILNKFSQSGLSVRKFAEQEGINLSTLYSWQKQFNTSGLNVSKVSSSD
KWSSEEKFSVVLETASLSVVELSEYCRAKGLYPEQVNAWKQACIAGNPSTTLTRKAKITP
EQKTDKKRINELERELRRKDKALAEAAALLVLGKKFRCLLERKRGRLISLTDRQKHAQWV
STAVASGARQDKACDMIGLSSRTLQRWRIDGDISADKRPTATRPEPGNKLSQAERQAVID
VCNSEEFASLPPSQIVPILADRGEYIASELSFYRVLHTENMLHHRGKAKPRNVHKKPTSY
TAKKANEVWSWDISYLPTTLIGKHYYLYMIEDIYSRKIVGWEVHDSETGEQAAALLERSV
WAEKCLKKDVVLHSDNGAPMKSLTMHAKMYDLGVVTSRSRPRVSNDNPYSESLFRTVKYH
PRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTPNQRHDGLDVGILAKRKALYQT
KRNEHPERWSKEELNWQPIGAVELNPEQHKEAA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcaaaggcattcaggtcaatttaaagaagcaatattaaacaagtttagtcaa
agtggtttgtcggttcgcaagtttgcagagcaagaaggcattaacctctcaaccctgtat
agttggcaaaagcaatttaatacttcagggttaaacgtgtcaaaagtcagttcatcggat
aagtggtcaagtgaggaaaagttttcagtggtattggaaaccgcctctctgtcggtagtt
gagttaagtgaatattgccgagctaaggggttataccctgagcaagttaacgcatggaag
caagcttgtattgccggtaatccaagtacaacactgacgagaaaagccaagataacacct
gagcagaagaccgataaaaaacgcattaacgagctagaacgtgagttacgtagaaaggat
aaagcgttagcggaagcggcagctttactcgtcctcggaaaaaagtttcgatgcctattg
gaaagaaaaagaggaagactgatttcgctgaccgataggcagaagcacgcgcagtgggtc
agtaccgctgtcgcatcaggtgcgagacaagataaggcctgtgacatgattggattatca
agtaggaccttgcagcgttggcgaatagacggtgacattagcgcagataaaaggccaacg
gcaacgaggccggagcctggaaataaactgagtcaagcagaaagacaagccgtgattgat
gtgtgtaatagtgaagagtttgcctcattaccaccaagccaaattgtcccgatactcgcc
gatagaggtgagtatattgcttcggagttgagtttttaccgtgtattacatactgaaaac
atgctgcaccaccgaggcaaagctaagccgagaaatgttcataaaaagccaaccagttat
acggctaaaaaagcgaacgaagtgtggagttgggatatcagttacctgcctacaacgctg
ataggaaaacactattatctgtatatgattgaagatatttacagtcgaaaaatcgttggt
tgggaagttcacgacagtgaaaccggtgagcaagctgcagcactactagagcgtagcgtt
tgggcagagaaatgcttaaagaaagacgttgtgttgcactcagataatggcgcgcccatg
aagagcctaacgatgcatgctaagatgtacgatttaggtgttgtgacctcacgaagtcgt
ccaagggtaagtaatgataatccatactcagaatcgctgtttagaacggtaaagtatcat
ccacgctggcctagtgaaggttttaaatcgttagaagcagcgcgtaaatgggtcaatgaa
tttgtttattggtacaacaacgagcatcgccatagcaggattaagtttgtgacaccaaac
caaaggcatgatggtcttgatgttggaatactggcgaagcgaaaagcgttgtatcagaca
aaaagaaatgaacatccagagcgatggtcaaaagaagagctaaactggcagccaataggc
gctgtggagttaaatccagagcaacataaagaagctgcttaa
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