Shewanella glacialimarina: FJ709_08890
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Entry
FJ709_08890 CDS
T07885
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgla03009
]
FJ709_08890
Enzymes [BR:
sgla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FJ709_08890
Ribosome biogenesis [BR:
sgla03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FJ709_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UCX04605
LinkDB
All DBs
Position
2064288..2064974
Genome browser
AA seq
228 aa
AA seq
DB search
MRLDKFVLKSTLLTKAQVIEQISLGNVLVNDQVNTDITSQVHENNLIQLNGLTLTTRPFR
YMLMHKQADTICSNADGHYPSLLNSIDVAHKDELHIAGRLDADTTGLVLITDDGRWSYNI
TRPECVCRKVYRVQLVKPINHDVIALFKKGLLLQGESKPTLPAELVIMSDTEVLLSITEG
RYHQVKRMFFTIGNRVNALHRQQVGNVLLDMPVGKWRDLTADEVRSFQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcggctagataaatttgtacttaaaagtacattgttaactaaagctcaggtcattgag
cagattagtctgggcaatgtcttggttaatgaccaggttaatactgacataacgagccag
gttcatgagaataacctgattcaattaaatgggctcacacttaccacaaggccatttcgt
tatatgctgatgcataaacaggctgacacgatttgttctaatgccgatggccattatccg
tcgttactcaatagcatcgatgttgcccataaagacgagctgcatatagcagggcgccta
gatgcagataccacaggcttagtgttgataaccgatgatggtcgttggtcatacaatatt
actcgaccagagtgtgtttgccgtaaagtgtatcgagtgcaattagttaaacctattaac
catgatgtaatagccttgtttaaaaaaggcttgttgttacaaggtgaaagtaaaccaacg
ttacctgccgaactggttattatgagtgatacggaggtgctgttatcgattacagaaggg
cgatatcatcaagttaaaaggatgttttttaccataggcaatcgcgttaacgccttacat
cgtcaacaagtaggtaatgtgctgcttgatatgcccgttggcaagtggcgagacttaaca
gcagacgaagtgagatcgtttcaataa
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