Shewanella glacialimarina: FJ709_09055
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Entry
FJ709_09055 CDS
T07885
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00061
Fatty acid biosynthesis
sgla00071
Fatty acid degradation
sgla01100
Metabolic pathways
sgla01212
Fatty acid metabolism
sgla02024
Quorum sensing
sgla04146
Peroxisome
Module
sgla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FJ709_09055 (fadD)
00071 Fatty acid degradation
FJ709_09055 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FJ709_09055 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ709_09055 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgla01004
]
FJ709_09055 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgla04147
]
FJ709_09055 (fadD)
Enzymes [BR:
sgla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FJ709_09055 (fadD)
Lipid biosynthesis proteins [BR:
sgla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FJ709_09055 (fadD)
Exosome [BR:
sgla04147
]
Exosomal proteins
Exosomal proteins of breast milk
FJ709_09055 (fadD)
Exosomal proteins of breast cancer cells
FJ709_09055 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UCX04634
LinkDB
All DBs
Position
2098390..2100063
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINHLPANVPAEIDPDQFPSLVAMFESAVAKYADQPAFINMGATMTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFAKTLEEVVDQTAVESVIITGLGDQLSAPKRTLVNFVVKYIKKMVPKYHL
PHALSFRDSLSKGRRLQYIKPGVSGDDLAFLQYTGGTTGVSKGAMLSHRNVVANVLQANG
AYSPALDDGKEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPAFVGELKKYPF
TALTGVNTLFNALVNNDDFKNLDFSGLKLSIGGGMAVQRAVADKWQAITKTRLLEGYGLT
EASPLVTCCPYNLEGYNGSIGFPAPSTFIQVRDDDGKVLAQGQTGELFTKGPQVMLGYWQ
RPEETAKVIDPDGWLATGDIGYMDEKGFFFIVDRKKDMILVSGFNVFPNEIEEVVALHPK
VLEVAAVGVANDASGELVKIYVVAKDKSLSEKELIEHCRHHLTGYKVPKLVEFRDELPKT
NVGKILRRQLRDEANKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaatcacctcccagccaatgtaccggctgagatagacccggat
caatttccttcattggttgccatgtttgaaagcgctgtagcgaaatacgctgatcagcca
gcttttatcaacatgggtgcaaccatgacctaccgtaagcttgaagaaagaagccgagct
tttgctgcttatttacaaaatgaattgaagcttgaaaaaggcgatcgagtggcattaatg
atgccaaatctactgcaatacccgatagcgctatttggtgtgttgcgtgctggtatggtc
gttgtaaatgttaatcctctttatactccaagagaacttaagcaccaattaatagattct
ggtgctaaagccatcgttgttgtatctaactttgccaaaacgctagaagaagttgttgat
caaacagcggtggagtcagtgataattactggtttaggcgatcaacttagtgcgccaaaa
cgtactttagttaattttgtggtcaagtatattaaaaagatggtacctaagtatcatttg
ccccatgcactttcatttcgagacagcttatctaaagggcggcggttacaatatattaaa
ccaggtgttagcggtgatgatttagcctttttacaatataccggtggcacaacgggggta
tcaaaaggcgcaatgttaagccatcgaaatgttgttgctaacgttttacaggcaaatggc
gcatactcgccggcattagatgacggtaaagagtttgttgttactgcattaccgctttat
catatttttgcattaacggtaaattgcttattatttttacataaaggcagtcaaaattta
ttaatcaccaacccaagagatattccagcatttgttggtgagcttaaaaaatatcccttt
acggcattaactggcgttaacactttatttaatgccttagttaataatgacgacttcaaa
aacttagattttagcggccttaaactgtcaattggcggcggcatggcggtacaaagagca
gttgctgataaatggcaagctattaccaaaactcgcttacttgaaggatatggattaacg
gaagcttcaccgttagttacctgttgtccgtataacttagaaggttataacggctccatt
ggttttccagcgccatcgacatttattcaagtgcgtgacgatgatggtaaagtattagct
caaggacaaacaggtgagctttttactaaagggccgcaagtgatgctaggttactggcag
cgtccagaagaaacagccaaagtaattgatccagacggttggttagccactggtgacatt
ggttatatggatgaaaagggctttttcttcatagtagatcgtaaaaaagacatgatttta
gtctctggctttaacgtatttccaaatgagattgaagaagttgtagcacttcatccaaaa
gtgcttgaagtcgcagcagtgggtgttgccaatgatgctagcggtgaattagtcaaaata
tacgtggttgcaaaagataagtcattgtctgaaaaagagctgattgaacattgccgtcat
catttaacgggatataaagtaccaaaactggtagaattccgagacgaattaccaaagacc
aatgtgggtaagattttacgcagacagcttcgagatgaagccaataaagcgtaa
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