Shewanella glacialimarina: FJ709_09415
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Entry
FJ709_09415 CDS
T07885
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00500
Starch and sucrose metabolism
sgla01100
Metabolic pathways
sgla01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
FJ709_09415 (glgX)
Enzymes [BR:
sgla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
FJ709_09415 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Pullul_strch_C
Motif
Other DBs
NCBI-ProteinID:
UCX04701
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Position
2171835..2174030
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AA seq
731 aa
AA seq
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MVNRTESNDKVEYKPSIVAGVNHLILDEGMPYPLGANLTENGVNFSLFSANATKVILCIF
DPISQLEIAQYILTHKTHHIWHGELTGAKAGLLYGYRVFGPYQPELGHRFNHHKLHLDPY
ARKLVGELQHSNALYGYDVDDASADLSFSQQDNAAFMPKCVVVDIERIKAIPIAPIRREL
NHSIIYETHVKGFTKLHPDLPREMCGTFAGLSHPAVVEYLTQLGITAIELLPVHAFFDEP
FLVEKKLNNYWGYNTAGFFAPHPQYLASDDIAEFRHMVSKMHQAGVEVILDVVYNHTAEG
NHLGPSYHFKGIDNASYYRLMPNEPRFYINDTGCGNTLNVNHPQVLMLIMDSLRYWVEVM
GVDGFRFDLASCLGRENYGFDPGSGFFDALMQDPTLCRVKLIVEPWDIGPGGYQLGNYPV
VFSEWNDRYRDTMRRFWRGDNGILSEFAKRFHGSSDFFEHNGRGPAASINFITSHDGYTL
HDLVSYQAKHNLANNEDNRDGHQENFSCHYGVEGETESSKINTVRSRQKRNFLATLLLSQ
GVPMLLSGDEAGHTQQGNNNAYCQDTPDNWFNWQAIDWDLVHFTQELIKLRKHYPLLCHK
EFIHQPEALFDNGIAWFNKLGEPMTKTLWSEHHCRTLTVIVTGNLLEAEVGAIPENTQAL
MLFINADEQQQTFHQPNLIHFGHWSCVLHTQSDTQIDVAQTQANLDGKFYLQPRSLMIFH
SHFQGVEHDRS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggttaatcgaactgaaagtaatgataaggttgagtataaaccgtcaattgtcgcaggc
gttaatcacctaatactcgatgaaggtatgccttatcctttaggggcaaatctaaccgag
aatggggtgaatttttcactgttttcagccaatgccaccaaagtcatattgtgtatattt
gatcccatttcacagcttgaaattgcccaatacatattgacccataaaacccatcatatt
tggcatggtgagttaaccggcgctaaagctggcttgctttatggttatcgagtgtttgga
ccatatcagcctgaactcggacatcgatttaatcatcacaagcttcatcttgacccctat
gcacgaaaactggttggtgaattgcagcatagtaatgccctttatggatacgatgttgat
gacgccagtgcagatctgtcgtttagtcagcaagataatgccgcctttatgcccaaatgt
gtagtggttgatattgaacgcattaaggcgatacctatagcgccgataaggcgcgagctt
aaccacagtatcatttacgaaacccatgttaagggatttaccaaactgcatccagattta
ccacgtgagatgtgcggtacattcgcaggcctgtctcatcccgcagttgtagagtattta
actcaacttgggatcacggcaattgagttactccctgtacatgcattttttgacgaacct
tttttggtagagaaaaaactcaataattattggggttataacacagcaggattttttgca
ccgcatccacaatatctggcatcagatgatattgctgagtttaggcacatggtgtcaaag
atgcaccaggccggtgtcgaggttattttagatgtggtttataaccatactgcagaaggt
aatcatttaggcccaagttatcattttaaaggcatagataacgcaagctattaccgttta
atgcctaatgaacctcgcttttatattaatgatactggctgtggtaatacccttaatgtt
aaccatcctcaggttttaatgttaatcatggactcattacggtactgggttgaagtgatg
ggagtagatggttttcgctttgaccttgctagctgtttaggccgtgaaaattatggcttt
gacccaggcagtggattttttgatgcgttaatgcaagacccaacattgtgccgggttaaa
ttaattgttgagccatgggatattggccccggtggatatcaattaggtaattatcctgtg
gtattcagtgaatggaatgacagataccgtgacaccatgcgccgattttggcgtggagat
aatggcatattgtctgagtttgccaagcggttccatggctcaagtgatttctttgaacac
aatggccgcggccccgcggcaagtattaactttattaccagtcatgatggttacactctg
catgatttggtgtcttatcaagctaagcacaacttggctaataacgaagataatagagat
ggtcatcaagaaaacttcagttgccattatggggtagaaggcgaaacagaaagcagcaag
attaatactgtgcgcagccgtcaaaaacgtaattttttagcgactttattgctatctcaa
ggcgtacctatgttgttaagtggcgatgaagctggccacacccaacaaggaaacaataat
gcctactgccaagatacgcctgataattggttcaactggcaagccattgactgggatttg
gttcatttcacccaagaattgatcaaattgcgcaagcattaccctttgctatgtcataaa
gagtttatccaccagcctgaagccttatttgataatggcattgcctggttcaataaacta
ggtgagccaatgaccaaaacgctgtggagtgaacatcactgccgcacattaaccgttatt
gttactggcaatttgcttgaagctgaagtcggcgccattcccgaaaatacccaagcgtta
atgctatttattaacgctgatgaacaacagcaaaccttccaccaacctaacttaatccat
tttggacattggtcctgtgtgttgcatacccaaagcgatacccagatagatgttgcacaa
actcaagctaatcttgatggtaaattttaccttcaaccccgtagtttgatgatatttcat
agccattttcaaggagtggaacatgaccgcagctaa
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