Shewanella glacialimarina: FJ709_11605
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Entry
FJ709_11605 CDS
T07885
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgla01011
]
FJ709_11605
Enzymes [BR:
sgla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FJ709_11605
Peptidoglycan biosynthesis and degradation proteins [BR:
sgla01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FJ709_11605
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
UCX05090
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All DBs
Position
2671438..2673381
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AA seq
647 aa
AA seq
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MRTTWINTCSPKRLTTLLVVTALTILSSTPANAYTAKQQQYLDAKKALDSGQTSRYQQLR
KQLGDYPLAIYLDYHTSIDDIVRMPGNKAFSAIEPFNTMPLYNSARYRYLMNAGNTQRWQ
DFLAISPTTPNDMRLQCYFLRAQLATGDKAAAYKGADRLWLHGQSRPKECDPLFTQWAKD
GYRTQELIWGRMLLSFDAGQTGLLSYLSQKVSKHRNDAELLLKVYKDPNILRNTKLFSSS
KPIVSDIVDAGLRKLARKDLKQATKLYVKYQKAGRFSEAKDRQLNHYLVRRGLIYQEEAL
IDHIDTMLPLLASDDLYEMRLRWAIRQQDFNTVNIYLAQLSQQGKEHSRWQYWQARMNDQ
QDTKKAQDNYLVLSQQRDFYGFNAAKVINKPLSFNDDNLTSNKALRAKLLDDPGMSRVIE
LRAIDKYLDSRTEWIYLMRRHDPAMTAEYGLYALEQGWYDLSVESSIQGQQWNALNLRFP
NAANEEFVNASKKYKVDINEIRAISRRESAFNYYATSGVGARGLMQLMPATAKQTAQKNK
IPFNDVKDLYKPSVNVMLGSAYYAELLKQFNNNRVLATAAYNAGPGSVKRWLKVSNGSLD
AMSFIETIPYTETREYVQAVLSYRMIYLQQDNPKADMFTKQELNYAY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactacatggattaatacatgttcacctaaacgactaacaaccttactcgttgtc
acggcgctgactattttatctagcacccctgctaatgcctacacggctaaacagcagcaa
tatcttgatgcgaaaaaagccttagacagcggacaaactagccgttatcaacaactcaga
aaacagctaggtgattatccattagccatttatcttgattatcacaccagtattgatgac
attgtgcgtatgccgggcaataaagcctttagtgccatcgagccgttcaataccatgcct
ttgtataattcagctcgatatcgttatttgatgaacgctggtaatacccagcgttggcaa
gactttttagctatctcaccgacaacgcctaatgacatgcgtttacagtgctatttttta
cgtgcgcaattagcaacgggtgataaagcagcggcatacaaaggcgcggatcgactatgg
ctgcatggtcagtctagacctaaagaatgtgatcctttatttactcagtgggccaaagat
ggctaccgtacccaggaattaatatgggggcgaatgctgctcagttttgatgcaggacaa
acaggtttattaagttatttaagccaaaaagtcagcaaacatcgtaacgatgctgaactg
ctattaaaggtatacaaagaccctaatatattaagaaataccaaactttttagcagctct
aaacctattgtgagtgatattgtcgatgcaggcttaagaaagcttgccagaaaagatctt
aaacaagccaccaaactttacgttaaatatcaaaaagcgggtcgattcagtgaggccaaa
gatcgtcaattaaatcattatcttgtcaggcgtggattgatttaccaagaagaagcatta
atcgatcatattgatactatgttaccgctattggcatctgatgacttatatgaaatgcgc
cttcgctgggctatccgccagcaggattttaataccgtaaacatttacctagcgcaatta
agtcagcaaggtaaagagcattctcgctggcaatattggcaagcccgcatgaatgaccaa
caggatactaaaaaagcacaggataactatttagtgttgtctcaacaacgggatttttac
ggttttaatgccgccaaagtgatcaataaacctttgtcatttaatgatgacaacttaacc
tccaacaaagcattacgcgcaaagttattagatgaccctggaatgtctagggtcatagag
ctaagggccattgataaatatttagattcgcgtactgagtggatatatctaatgcgtcgc
catgatccagccatgacagctgaatacgggctttatgcgcttgagcaaggctggtatgac
ttaagtgttgagtcaagtattcaagggcaacaatggaacgcattaaatctgcgttttcct
aatgccgccaatgaagaatttgttaacgccagtaaaaagtataaagtcgatattaatgaa
attagggctatttcacgccgtgaaagtgcgtttaattactatgcaacctcaggcgtgggt
gccaggggtttaatgcaattaatgcctgctacagcaaaacaaacagcacaaaagaacaaa
attccctttaacgacgtaaaagacttatacaagccaagcgttaacgtcatgctaggcagt
gcctactatgccgagttattaaagcaattcaataataatcgagtattggcaacagctgca
tataacgcaggtcctggtagtgtaaaacgttggttaaaagtgtctaatggatcattagat
gcgatgagctttattgaaaccatcccatacactgaaacccgtgaatatgttcaagcggta
ttaagttatcgaatgatttatttacaacaagataaccccaaagccgatatgtttaccaaa
caggaactgaattacgcttattaa
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