Shewanella glacialimarina: FJ709_11635
Help
Entry
FJ709_11635 CDS
T07885
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FJ709_11635 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_11635 (recD)
Enzymes [BR:
sgla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FJ709_11635 (recD)
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJ709_11635 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
RecD_N
Helicase_RecD
UvrD_C_2
SH3_13
AAA_11
AAA_22
SLFN-g3_helicase
UvrD-helicase
DEAD
nSTAND3
AAA_16
PhoH
UvrD_C
ResIII
AAA_25
AAA_33
SRP54
NTPase_1
FtsK_SpoIIIE
AAA_29
Zeta_toxin
AAA_28
Plug_translocon
T2SSE
AAA
MeaB
Motif
Other DBs
NCBI-ProteinID:
UCX05095
LinkDB
All DBs
Position
2685122..2687362
Genome browser
AA seq
746 aa
AA seq
DB search
MLTTTLPMAQLLKQWQQAKLITALDRHFALELANIENMAASSVMPTSDIKSVDNTDPVDQ
VDSDLLLLICTLLSQQLSNQHSCLVLHNIVLTNPMAEDIGSHPFAVSAEASCQITVDHNQ
LIEQLSQLNAIGQPGDNTPMIIEFNRLYLNKYYVFETQVALKLRQLASINILADNPLLPG
YLDDLFPPQIHNSHQFDWQKIATATALTKALAVITGGPGTGKTTTVTKLLLLLLTQQSMT
IRLVAPTGKAAARLSESIKASKNRLRQSLTANQQPQALLTALEAIPEEAATLHRLLGVIP
HSHQFRHNKDNPLRLDLLVIDEASMVDLPMMNKILSALPDNARLILLGDQDQLASVEAGA
VLADICQGLKQTAQTAKADINVDINADQTNLAPWRMHYSQQQADNIKRLTGQDVSQFIDT
LDDNNTQNNSDTHNTNSQFGDSLCMLMHSHRFKGDAGIGQLANAVNDANVSHIRQVWQHG
YAELNWFEHQTHSNKISANQISANQDNAGKQQLLALSVSAYQPYLDMIHFNQNVFNNNVA
NTPVYGAEQIIEQYNQYRMLCAMRASEYGVDGMNIAITDSLRQAQLIQPKQEFYLGRPII
VQNNDYNLGLFNGDIGLILQDQQNPARLMAHFIQADGNLLKVLPARLPKHDTCFAMTVHK
SQGSEFDQVSFVLPPRPSVAQWQLLTKELVYTAITRAKNHFYCLGSTTVFERAAKQVTTR
ASGLALRLWAPEANTELNAEIKTKAS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaccacgctccccatggctcaattgcttaaacagtggcaacaagcaaaattg
atcaccgcgttagacagacactttgcccttgagctcgccaatattgaaaacatggctgcc
tctagcgttatgcccacaagcgatatcaagagtgttgataataccgatccagttgaccaa
gtagacagtgatttattgctattaatctgcaccctactgagtcagcaattgtcgaatcag
cacagttgtttagtgttgcataatattgtgctgactaatccaatggcagaagacattggt
agccacccttttgcggtgagtgctgaagcatcatgtcaaatcacagtcgaccacaatcaa
ttaattgaacaacttagccagcttaatgctatcggtcagccaggtgataacacgccaatg
atcatcgaatttaaccgactgtatctgaataaatactatgtgttcgaaactcaggtagca
cttaaattacgccaacttgccagtattaatatacttgccgacaacccattactgcctggc
tatttagatgatttgttcccaccacaaatccataatagccatcaattcgattggcaaaaa
atagccacagcaaccgcgctaaccaaagcgcttgccgtcattactggcggcccgggtacc
ggtaaaaccaccacagtcaccaagttactcttgctattactgactcagcagagtatgacc
attcgattagtggccccaacaggtaaagcggcagctagactgagtgaatcaatcaaagcc
tcgaaaaatcgtttaagacaaagcttaaccgcaaatcagcaacctcaagcactattgacc
gcattagaggcgatacctgaagaagccgccactttgcaccgtttactcggtgtcataccg
cattcccatcaatttaggcataacaaagacaatccattgcgacttgatttgctggtcatt
gatgaagcatcaatggtcgacttacctatgatgaacaaaatattaagcgcactgccggac
aacgccaggttaattttattaggcgatcaagatcaattagcctcggttgaggccggtgct
gtgttagctgatatttgccagggactaaaacaaactgcacaaactgcaaaagctgacatt
aacgttgacatcaacgcagatcaaaccaatctggcgccctggcgtatgcattatagtcag
cagcaagctgacaacattaaacgccttactgggcaagatgtgagtcagtttattgatacc
cttgacgataacaatactcaaaataattctgacacgcataatactaacagtcagtttggc
gacagcttatgtatgttgatgcatagccacagatttaagggtgatgccggcattggccaa
ttggcaaatgcggttaatgacgcgaatgtcagccatatccgtcaagtgtggcagcacggt
tatgctgaactgaactggtttgagcatcaaacccattccaataaaattagcgccaatcaa
atcagtgctaatcaagacaacgctggtaaacagcagttattagccttgtccgtcagcgct
tatcagccgtacttagacatgattcatttcaatcaaaatgtgtttaataataatgtcgcc
aatacgcctgtttatggcgcggaacaaattattgagcaatataatcagtatcgtatgctg
tgcgccatgcgcgcatctgagtacggagtcgacggaatgaacatcgcgattactgacagt
ttacgccaagctcagcttattcaaccaaagcaagagttttaccttgggcggccaatcata
gttcaaaataatgattataatttaggcctgtttaacggtgatattggcctgattttacag
gaccagcaaaatccggctcggttaatggcacactttatccaagctgatggcaatttatta
aaagtgttacccgcaagactccctaaacatgatacctgctttgccatgacggtacataaa
tcccagggcagtgagtttgatcaagtcagctttgtgctgccgccaaggccaagtgttgca
cagtggcaactgctaactaaagaactagtttataccgcgatcactcgagcaaagaatcac
ttctattgtttgggcagcaccactgtgtttgagcgagcggcgaaacaagtcaccacccga
gcatcaggattagcactgcgtttatgggctcctgaagcgaatactgagttgaatgctgag
attaaaactaaggctagctag
DBGET
integrated database retrieval system
