Shewanella glacialimarina: FJ709_12095
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Entry
FJ709_12095 CDS
T07885
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgla03016
]
FJ709_12095 (truC)
Enzymes [BR:
sgla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
FJ709_12095 (truC)
Transfer RNA biogenesis [BR:
sgla03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FJ709_12095 (truC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UCX05175
LinkDB
All DBs
Position
complement(2791467..2792282)
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AA seq
271 aa
AA seq
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MADIEPEQEGDQTLNADEEQQSPPELAVLFEDEHIVAIHKPAGLLVHRSYLARKERFFAM
QLTRDLVGCHVFPVHRLDRPTSGVLLFAKSSECARTLCEQFENHTVTKRYLALVRGNMHD
GGELDYALRVELDDVADKFAAADKPAQDAVTFYQPLLNSEIPFSSGRYPTSRFGLVKLTP
KTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNKFGREHFGVNRLWLIAKSLQFTHPITGEP
MHIETELEQEWLDLFSLLGWNDLDTEASMLI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggctgatattgagccagaacaagagggtgatcagacgttaaatgctgatgaagagcaa
caaagccccccagaattagccgttttatttgaagatgaacacattgtcgctattcacaaa
cccgcaggcttgttagtgcatcgtagctacttggcgcgtaaagaacgtttttttgctatg
caacttacccgggatctcgttggctgccatgtttttccagttcatcgtttagaccgcccc
acatctggcgtgttgttatttgccaaaagcagtgaatgtgcacgtactttatgtgagcaa
tttgaaaatcataccgtcactaaacgctatttggctttagtgcgcggtaatatgcatgat
ggcggtgagctcgactatgctttaagagttgaacttgatgatgttgctgacaaatttgca
gctgcggataaacccgctcaagatgctgtgaccttttatcagccgctacttaatagtgaa
atcccatttagttcaggtcgttatccaaccagtcgtttcggattagtcaagctcacacct
aaaacaggcagaaaacatcaattgcgtcgccatatggcacatttacgtcatcctattatt
ggtgataccacccatggcgatggtaaacaaaataaattcgggcgtgagcattttggcgtc
aaccgtttatggcttattgctaaaagcttgcaatttacccacccaataacgggtgagcca
atgcacatagagactgagttagaacaagagtggttagatcttttcagtttactggggtgg
aacgatctagatactgaagccagtatgcttatttaa
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