Shewanella glacialimarina: FJ709_12340
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Entry
FJ709_12340 CDS
T07885
Name
(GenBank) Na+/H+ antiporter NhaC family protein
KO
K18218
tetracycline resistance efflux pump
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_12340
01504 Antimicrobial resistance genes [BR:
sgla01504
]
FJ709_12340
Transporters [BR:
sgla02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FJ709_12340
Antimicrobial resistance genes [BR:
sgla01504
]
Gene variants
Tetracycline resistance genes
Transporters
FJ709_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
UCX05217
LinkDB
All DBs
Position
complement(2853494..2855053)
Genome browser
AA seq
519 aa
AA seq
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MNVLSHADSALSLLPPLVAIVLAIITRKVLLSLGVGIVVGALLLTQFSLGDSSLFLLNTV
QGLVWSDGALNSWNLQILGFLVMLGMITALITVSGAARAFADWAKGHIRSKRDAKLMTIF
LGCVVFIDDYFNSLVVGSISKPITDRYHVSRAKLAYLLDSTAAPICVISPISSWGAYIIA
LIGGILTAHGFAESGHLSVFVQMIPMNFYAIFALLLLLCVALFGLDVGPMRQHELNAKKG
ELYDESKGLPPGANADLPEADTGKVIGLFLPILTLIVATVYFMITSGADVLAADGKAFTI
LGAFENTQVSQSLFYGSVIGFSITLILAFIQKLEMGLIFKGVVTGARSMLPAIYILLFAW
SIAGVIGQLETGKYMASLVTGSIPFELLPVVLFILAGITAFSTGTSWGTFGIMLPIAADM
AMGSDSNMMLPMLSAVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVITQLPYALIVAF
ISIIGYTVLGFTDSLISGLLACSLVFVISVFALAFFARR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacttagtcatgccgattcggcactatctttacttccacctcttgttgccatt
gttttggctattatcacccgtaaagttttactgtcccttggcgtggggattgtggtcggc
gcattattacttacacagttctctttaggggatagtagtctatttttgctcaacacagtt
caagggttggtttggagtgatggcgcgctaaatagctggaatttacaaatcttaggtttc
ttagtcatgcttggcatgataaccgctttaataaccgttagtggtgcagcaagggcgttt
gctgattgggctaaagggcatattcgcagtaaacgtgatgccaagttaatgaccatattt
ttaggctgtgtggtgtttattgatgattattttaacagtttagtggtaggctcaatttca
aaacctattaccgatagataccatgtatcgcgggctaaattggcatatttattagattct
acagccgcacctatttgtgttatttcacctatttcaagttggggagcctatattatcgcc
ttgatagggggcatcttaaccgcgcatggttttgctgagtcaggtcatttgagtgtgttt
gtccaaatgatcccgatgaatttttatgccatattcgcgttactattattattatgtgtt
gccttgttcggtcttgatgtcggccctatgcgccaacatgaattaaatgccaaaaaaggt
gagctttatgatgaatctaaaggccttccccctggtgcaaacgctgacctgcctgaagct
gatacggggaaagtaataggtttatttttacccattttgacattaatcgttgccacagtt
tactttatgataactagcggtgcagatgtacttgcagccgatggtaaagcctttactatt
ttaggcgcttttgaaaatactcaagtgagccaatcattattttatggctcagtcattggt
tttagtattacgttaattttagcttttattcaaaagttagagatggggttgatttttaaa
ggtgtggttactggtgcgcgttcaatgttacccgctatctatatattactgtttgcctgg
tctattgctggagttattggtcagctagaaaccggtaaatatatggcaagcttagtcacg
ggttcaattccttttgagctattgcctgtggtgttatttattcttgcaggcattaccgct
ttttcaaccggcacaagttggggcactttcggcattatgttgccaattgctgccgatatg
gcaatgggaagcgactcaaatatgatgttacctatgctgtcggctgtgcttgcaggtgct
gtttttggtgatcattgttcacctatatccgacaccactattttgtcatcgacaggggcc
agttgtcatcatatagaccatgtgattactcagttaccttatgccttaattgtggcgttt
atcagtattattggctatacagtgcttggctttactgactcattaatcagtggattatta
gcttgtagtcttgtgtttgtgatcagcgtgttcgctttggctttttttgcacgtcgctag
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