Shewanella glacialimarina: FJ709_12355
Help
Entry
FJ709_12355 CDS
T07885
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgla03036
]
FJ709_12355
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_12355
Chromosome and associated proteins [BR:
sgla03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
FJ709_12355
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJ709_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
UCX05220
LinkDB
All DBs
Position
2857604..2858011
Genome browser
AA seq
135 aa
AA seq
DB search
MSDFLDILTHGRRFKAAVKELSIEDLNDLAAKLDKIIVEREEEAKADEAANAERNALIAG
ILAQIENSGLSIEDLGEVTASKSAPKKRAPRPAKYQITLDGELIQWTGQGRMPTVFKKEV
DAGKSMSAFLIPGME
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttttagatattttaacccatggtcgtcgttttaaagctgctgtaaaagaa
ctcagtattgaagatcttaacgatcttgctgcgaaacttgataaaattatcgttgaacgt
gaagaagaagccaaagcagatgaagcggcaaatgccgaaagaaatgctcttattgctggc
attttagctcaaatcgaaaacagtggtttatcgattgaagatcttggcgaagtcacagca
agcaaatcagcacctaaaaaacgcgctcctcgtccagcaaaatatcaaatcaccttagac
ggtgagttaattcaatggactggccaaggccgtatgccaacggtatttaaaaaagaagtt
gatgctggtaaatccatgagtgcctttttaattcctggcatggaataa
DBGET
integrated database retrieval system