Shewanella glacialimarina: FJ709_12375
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Entry
FJ709_12375 CDS
T07885
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FJ709_12375
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgla01007
]
FJ709_12375
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgla03016
]
FJ709_12375
Enzymes [BR:
sgla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
FJ709_12375
Amino acid related enzymes [BR:
sgla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FJ709_12375
Transfer RNA biogenesis [BR:
sgla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FJ709_12375
Prokaryotic type
FJ709_12375
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
UCX05223
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Position
2860115..2861824
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AA seq
569 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSWLPSGLRVLRKVEGIVREE
MNNAGAIEILMPLVQPADLWMETGRWEKFGPELLRFQDRHNRDFVLGPTHEEVITDLVRK
ELSSYKQLPINLYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQQTMDETYQSMYTA
YSNILSRMGLEFRPVLADTGSIGGSVSHEFHVLANSGEDLIAYSTGSDYAANIEKAESPM
PTLTRQDPTQELKPVDTPNAKTIAELVEQFTLDITKTIKTLIVKGASEDAPLVALIVRGD
HELNEIKADKLEAVASPLEFATEAEIRAAVGAGPGSLGPVGLSMPIIIDHSVAVLSDFAA
GANQDDIHLFGINWERDLPLAVAADIRNVVEGEATPDGLGTYAMARGIEVGHIFQLGTNY
SKSMNATVLDENGKAQVLLMGCYGVGVSRIVAAAIEQNHDDRGIIWPESIAPFQVGILPM
NMHKSHRVADMAEKLYADLQAAGIEVLMDDRKERPGVMFADMELIGLPHVIVIGDRNIDE
GVFEYKNRRTGEKQNIPFDQIMTFLSAVK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttagtaagtacctgctttcaacacaaaaagaaacccctgcaaatgcagaagtc
attagccatcagttaatgctacgtgcgggtatgatccgtcgtaatgcgtcaggtttatac
agctggttgccgtcaggtttacgagttcttcgtaaagtcgaaggtatcgtgcgtgaagaa
atgaacaatgcaggtgctatagaaattcttatgccgttagtccaacctgctgacttatgg
atggaaactggccgttgggaaaaatttggcccggaactactccgcttccaagaccgtcat
aaccgtgatttcgtattaggcccaactcacgaagaagtgattactgacttagtacgtaaa
gaattaagttcgtacaaacagttaccgataaacctttatcaaattcaaaccaaattccgt
gatgaagttcgtccacgctttggtgttatgcgtgctcgtgaatttttaatgaaagacgct
tactcattccatttagatcagcaaaccatggatgaaacttatcagtccatgtataccgct
tatagcaatattttaagccgtatgggattagagttccgccctgttcttgctgatacaggc
tcaattggtggcagtgtttcgcatgagtttcatgtattagctaacagtggcgaagactta
atcgcttattctactggcagtgattatgcagcgaatatagagaaagctgaatcgccaatg
ccgacgctaactcgtcaagatccgactcaagagctaaagccagtcgatacgcctaatgca
aaaactattgctgagttagttgaacagtttacccttgatatcactaaaacgattaaaaca
ttaatcgttaaaggcgcatcagaagacgcacctttggtggcattaattgtgcgaggcgat
cacgaacttaatgaaatcaaagccgataaacttgaagcggttgcatcacctttagagttt
gccactgaagctgaaattcgagcggctgtaggtgcaggaccaggttctcttggccctgtc
ggattgagcatgccaattattatcgatcacagtgtggcggtgttaagcgactttgccgct
ggtgcaaaccaggatgatatacatctctttggtatcaactgggagcgtgacttaccttta
gcggtagctgccgatattcgtaatgtggtcgaaggtgaagcaacaccagatggtctgggc
acctatgcaatggcacgtggtattgaagtgggtcatattttccaattaggcactaactat
tcaaaatcaatgaacgcgactgtacttgatgaaaatggtaaagcccaagtattattaatg
ggatgttatggtgtaggagttagccgtatagtggctgccgctattgaacaaaaccatgat
gaccgcgggattatttggcctgaatcaattgcaccattccaggtcggtattttacctatg
aatatgcataaatctcatcgcgttgcagacatggctgagaaactttacgctgacttacaa
gctgctggtatagaagtactgatggatgaccgtaaagagcgtcctggggttatgtttgcc
gacatggagctgattgggttacctcatgttatcgttattggtgatcgtaatatcgatgaa
ggtgtatttgaatataaaaatcgccgtacaggggagaaacaaaacattcctttcgatcaa
atcatgacgttcttatccgctgtgaaatag
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