Shewanella glacialimarina: FJ709_12485
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Entry
FJ709_12485 CDS
T07885
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sgla
Shewanella glacialimarina
Pathway
sgla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJ709_12485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_12485
Transporters [BR:
sgla02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FJ709_12485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
UCX05230
LinkDB
All DBs
Position
2873662..2874687
Genome browser
AA seq
341 aa
AA seq
DB search
MSTSTTINPIWKSIKSAVKLTAIASILASSFNVFAEPIEIKFSHVVAENTPKGQMALKFK
ELVEQRLPGEYTVSVFPSSQLFGDNNELAALLLNDVQIVAPSLSKFERYTKKLQVFDLPF
LFEDMAAVDRFQQSEEGQRLLNSMNRKGLVGLGYLHNGMKQFSAHAPLPTPQDANGKKFR
IMASDVIAAQFDAVKAIPVKKPFSEVFTLLQTRAIDGQENTWSNIYSMKFYEVQSHITES
NHGVLDYMLVTSNTFWKSLPKDKREIIKKSLDEAIVLGNQIAAAKEGEDKQAILDSKRSE
LVSLTAVQRQQWVDAMKPVWTKFESQIGKDVIEAAQAANKQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcaaccactatcaaccctatatggaaatcaataaagtctgcagtaaaactc
actgctatcgcatcgattttagcttctagctttaatgtttttgctgagcctatagaaatt
aagttttctcatgtggtcgcagaaaatacccctaagggccaaatggcacttaaatttaaa
gagttagtcgagcaacgcctaccaggcgaatataccgttagcgtatttccaagttcgcag
ttattcggggataacaatgaactcgcggcattattattaaacgatgtgcaaattgttgca
ccatcactttcgaagtttgagcgctacacgaaaaaacttcaggtgtttgatcttcctttc
ttattcgaagatatggctgcggtcgaccgttttcaacaatctgaagaaggtcaaaggctc
ttaaactcgatgaaccgcaaaggtcttgtcggtttagggtatttacataatggtatgaag
caattttcagcccatgcgcccttgcctaccccacaagatgccaatggtaaaaaattccgt
attatggcttctgacgttattgcggcacaatttgatgccgtaaaagcgattccagttaaa
aagccattctcagaggtgtttacccttttacaaacccgcgctattgatgggcaagaaaac
acttggtcaaatatttactcgatgaaattttatgaggtacaaagccatatcactgaaagt
aaccacggcgtattggactacatgttagtgacttcaaacactttctggaaaagcttacct
aaagacaaacgtgaaattatcaaaaaatcactcgacgaagccattgtattaggcaatcaa
attgccgcggctaaagaaggtgaagataaacaggctattttggattcaaagcgctctgaa
ctggtgtcattaactgctgtacaacgccaacaatgggttgatgccatgaagcctgtatgg
actaagtttgagtctcaaatcggtaaagacgtcattgaagcagctcaggccgcaaacaag
caataa
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