KEGG   Shewanella glacialimarina: FJ709_12505
Entry
FJ709_12505       CDS       T07885                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
sgla  Shewanella glacialimarina
Pathway
sgla02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sgla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FJ709_12505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sgla02022]
    FJ709_12505
Two-component system [BR:sgla02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   FJ709_12505
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 Mg_chelatase Herpes_BLRF2 AAA_3 HTH_50
Other DBs
NCBI-ProteinID: UCX05233
LinkDB
Position
2878771..2880147
AA seq 458 aa
MSSLGDINQLQVIIVDDEPHIGSVLSQLFKLEGISAASTTQPTQVAELIHNDWPGVVFSD
VNMPQLNGLSLLQQLIHKDPDLPVILITGFGDIAMAVDAVKKGAYDFLEKPFNNEHVVDV
AKRALEKRQLTLENRKLKQELESHIAPGPRILGHSPGIIKMRNILNQVINVPADIMIEGE
TGAGKELVARYLHDHSLRSKHNFVAINCGAIPESLIESELFGAQAGAYTGNDKTRIGKFE
YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNQSIELDIRVIAATKVNLQQLCE
TGEFRQDLLYRLNLVTVPIPALRERREDIPILFLHFARIASTRYHKALIALNPEQQAMLT
SHDWPGNVRELRNLAERYVLLGAEAAFAAGNIDNHPTMHSNMSLQQRVDFFERLLIEESL
SYNKGSIKLTMEQLELPRKTLYDKMKKFEIDRKQFTDH
NT seq 1377 nt   +upstreamnt  +downstreamnt
ttgagctcactaggtgatataaaccaactacaagtcattattgttgatgatgagcctcat
attggcagcgtgctgagtcaattattcaaattagagggtatcagtgccgcatcaacaacg
cagccaacacaggtcgctgaactcattcataatgattggcctggtgtggtgttttctgat
gtcaatatgccgcaactgaatggattaagcctattacagcaattaatccacaaagaccca
gacctccccgtgatactcattactggtttcggcgatattgccatggcagttgatgcggta
aaaaaaggggcttatgactttcttgaaaaaccttttaataatgaacatgtggttgatgtt
gccaagcgcgcgttagaaaaacgccaattaaccctcgaaaaccgcaaacttaaacaagaa
ttagagtcacacatagcgcctgggccgcggattttaggccacagcccaggcattataaaa
atgcgcaacatactcaaccaagtgataaatgtacctgctgacatcatgattgaaggtgaa
accggcgcaggaaaagagttagttgcccgctatctacacgaccatagtcttcgaagtaaa
cacaactttgtggctattaactgtggtgcaattcctgaaagtcttattgaaagtgagtta
tttggcgctcaagcaggtgcttatacaggtaacgataaaactcgtatcggcaagtttgaa
tatgctaatggtggcacactatttttagatgaaattgaaagtaccccactcagtttacaa
gtcaaattacttagagtgcttgaagatcgtaaggttgaacgtttaggctctaaccagtca
attgaactggatattagagtcattgctgccacaaaagtaaacttgcagcaactctgtgaa
accggtgagttccgtcaagacttactttatcgtttaaacttagtcacagtgccaattcct
gccttaagagagcgcagagaagatatccctattctgttcctacattttgctcgaatcgct
tctactcgctaccacaaagcgcttattgcattgaatcctgagcagcaagcaatgctaacc
tcgcatgattggccaggtaacgtgcgagagttacgtaatttagccgagcgctacgtgtta
ttaggcgcagaagccgcttttgccgcaggtaatatagacaatcaccccactatgcattcg
aatatgtctttgcaacagcgagtcgacttttttgaacgtttattaatagaagaatctttg
agttataacaaaggcagcataaagctgacaatggaacaactcgagctcccccgaaaaacg
ctttacgataaaatgaaaaaatttgaaatagatcgtaagcaattcaccgatcactaa

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