Shewanella glacialimarina: FJ709_12560
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Entry
FJ709_12560 CDS
T07885
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00280
Valine, leucine and isoleucine degradation
sgla01100
Metabolic pathways
Module
sgla_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FJ709_12560
Enzymes [BR:
sgla01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
FJ709_12560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BT_MCC_alpha
HlyD_D23
Biotin_lipoyl_2
GARS_A
RimK
ATP-grasp_3
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-ProteinID:
UCX05243
LinkDB
All DBs
Position
2892455..2894491
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AA seq
678 aa
AA seq
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MITKLLIANRGEIACRIIKTAKAMGVRTIALYSDADKDALHVAMADESYHLGGSAPADSY
LKADLIIDIAKRSGAEAIHPGYGFLSENAEFARKCEQNGIAFVGPGSDAIDAMGSKSAAK
QIMGKANVPLVPGYHGDDQSDENLVFQATQVGFPLLIKAAYGGGGKGMRIVENDGETLEA
IRSARREATSSFGNDKLLMERYLRQPRHVEVQVFADSKGNAIYLSDRDCSIQRRHQKVVE
EAPAPGLSDELRVQMGEAAVAAAKAIDYVGAGTVEFLLDTDNSFYFMEMNTRLQVEHPVT
EMVTGQDLVKWQLLVASGGELPLKQDEVRIHGHSFEVRIYAEDPQNEFLPASGKLNFLRE
PEQNRHVRIDSGIRENDVISNFYDPMIAKLIVWDETRPRALHRLVNALESYQISGLKHNI
EFLANIAEHPAFAKADFCTDFIERYGNTLIGDASSESDTAIALAGLYQVLLRQQQAKVNA
VNSNDPYSPWGQVSGFRLNSASIHHVALLDEKHELQNLLMTDLGSALHLGLNGQALKLAG
QIKGDVLFAEINGHKSKVPVSCDGDDFTLFLPSGSYHFTAVLAQVADETINSADKLKAPM
NGTVVTHLVEVGATVKAGQGLLVMEAMKMEYTIEAPFDGVVTEFYFQSGELVSDGVQLLH
VEESVKQATTETEKEAKT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgattactaaattactgatagccaaccgtggtgaaattgcctgccgtattattaaaacg
gctaaggccatgggtgtacgtaccatagccttatattctgatgccgataaagatgccctt
catgtcgctatggcggatgagtcttatcacctgggtggcagtgccccagcggattcatat
ttaaaagccgatttgattattgatattgccaaacgttctggcgccgaagccattcaccca
ggttatggctttttgtctgaaaatgcggagtttgcccgtaagtgcgagcagaacggtatt
gcttttgtcggtcctggtagtgatgccattgatgccatgggcagtaaaagtgcggcaaaa
cagattatgggtaaggcgaatgtgccattagtgcctggctatcatggtgatgatcaaagc
gatgaaaatttagtttttcaagccacacaagtcggctttccactactcattaaggctgca
tatggcggtggtggtaaaggcatgcgcatcgttgaaaatgacggtgaaacccttgaagct
attcgctctgctcgtcgtgaagccacctcatcatttggtaatgataaattattaatggag
cgttacttacgtcagccacgccatgtagaagttcaagtttttgccgacagtaaaggcaac
gctatctatttatcagatcgtgattgctctattcaacgccgtcaccaaaaagtggttgaa
gaagcgccggcgccaggtttgtcagatgagcttcgtgttcaaatgggtgaagcagcagtt
gctgctgccaaagccattgattatgtaggcgcaggtacggttgagtttctacttgatacc
gataacagcttctacttcatggaaatgaatactcgtttacaagttgaacatccagtgaca
gaaatggtcacaggccaagacttagtaaaatggcagcttctagtcgccagtggtggagaa
ttaccgctaaaacaagatgaagtgcgcattcatggtcactcatttgaagtgcgtatttac
gcagaagacccacagaatgagtttttacccgctagcggtaaactgaattttttacgtgaa
cctgagcaaaaccgtcatgtgcgtattgactcaggcatccgtgaaaacgatgtaatcagt
aatttctatgacccaatgatcgctaaattgattgtatgggatgaaactcgtccacgtgcc
ttacatcgcttagttaatgcactagagtcatatcaaataagtggccttaagcataacatt
gagtttttagccaatattgctgaacaccccgcgtttgccaaagcagatttttgtaccgac
tttatcgagcgctatggcaatactttaattggcgatgctagcagtgaatctgatactgcg
attgccctcgccggtttatatcaggtgctattacgtcagcaacaagcaaaagtgaatgcc
gttaatagcaacgatccctattctccctgggggcaagtcagtggctttagattaaacagt
gctagcattcatcatgttgccctacttgatgaaaaacatgaactgcaaaacttactgatg
acagacttaggcagcgcattgcacttaggcctaaatggccaggcgctaaaactagccggt
caaattaaaggtgatgtgttgtttgctgaaattaatggccataaaagtaaagtgcctgtc
agctgtgatggtgacgactttaccttgtttctccctagcggcagttaccactttaccgca
gtgcttgcacaagttgccgatgaaaccattaacagcgcagataagttaaaagcgccaatg
aacggcacagtggtgactcatcttgttgaagtgggcgcaaccgttaaagcgggacaaggc
ctattagtgatggaagccatgaaaatggagtacaccatagaagccccatttgatggcgta
gtcaccgagttttacttccaaagtggtgagttagttagcgatggcgtacagctgttacat
gtcgaagagtctgtcaagcaagcgactacggaaactgaaaaggaagctaaaacatga
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