Shewanella glacialimarina: FJ709_12755
Help
Entry
FJ709_12755 CDS
T07885
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgla03000
]
FJ709_12755
Transcription factors [BR:
sgla03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FJ709_12755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UCX05278
LinkDB
All DBs
Position
complement(2939738..2940649)
Genome browser
AA seq
303 aa
AA seq
DB search
MARRLPPLNAVKAFEAAARNLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIQLGEATDRLLARSAVGSLTVSMSPSFAIQWLVPRLAKFSEKN
PDIDVRIKAVDSDTGSLTDDVDVAIYYGQGNWAGLRADKLRNEVLIPVCSPLLLNGPKPL
STPSDLKYHTLLHDSSRHDWQAWFRQCGVSDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFSEVLVSKDAYYLVCQQNHSELGKVSAFREWMVDMFAEESRSEL
LTG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgattaccgcccttgaatgcagttaaagcatttgaagcggcagcaagaaac
ctcagttttactagggctgcagaggagttgtttgttactcaggctgcggtgagccatcag
attaaagcattagaagattttctagggttaaaactttttagacgtaaaaatagatcatta
ctgttaaccgaagaaggtcagagctactttcttgacatcaaggatattttcattcagttg
ggggaggcgaccgaccgcttgcttgcccgcagcgctgtgggctcgttaacggtaagtatg
tcaccgagttttgcgattcaatggttggtgccgcggttagccaaatttagtgaaaagaat
cctgatattgatgtgcgtattaaagcggtagacagtgatactgggtcgttaacagatgat
gttgatgtggcaatttattatggtcaaggtaattgggcagggcttagagcggataaactg
cgcaatgaagtattgatccccgtttgttcaccattgttattaaatggacctaagccacta
agtaccccaagtgatttgaaatatcataccctattacatgactcaagccgccacgactgg
caggcctggtttagacaatgcggggtaagtgatatcaatgtcaatcaaggccccattttt
agtcattcatccttagtgttacaagccgctgcccacgggcagggggttgcattgggctac
agcgtgttagctaggccagatattaaagcgggtcgtctggtatgcccgttttcagaagta
ttagtcagtaaagatgcatactatttagtgtgtcagcagaaccattctgaattaggcaaa
gtcagtgcatttcgtgaatggatggtggatatgtttgctgaggagtcacgcagtgaatta
ctcacaggatag
DBGET
integrated database retrieval system
