Shewanella glacialimarina: FJ709_13010
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Entry
FJ709_13010 CDS
T07885
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
sgla
Shewanella glacialimarina
Pathway
sgla02020
Two-component system
sgla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJ709_13010
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FJ709_13010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgla03000
]
FJ709_13010
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sgla02035
]
FJ709_13010
Transcription factors [BR:
sgla03000
]
Prokaryotic type
Helix-turn-helix
Other families
FJ709_13010
Bacterial motility proteins [BR:
sgla02035
]
Flagellar system
Flagellar assembly proteins
Others
FJ709_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA
AAA_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UCX05325
LinkDB
All DBs
Position
complement(2996392..2997822)
Genome browser
AA seq
476 aa
AA seq
DB search
MMQIEQRILIVGTLSERVTRLCCIFEFLGEQCDILTVDALLPLIEESRYRAIVIDSDVVG
LDSVKNIAAIAPWQPLLLLGNTAIEASSILGVIEEPINYPQLTELLHFCQVFGQAKKEQA
PTSGNQTKLFRSLVGRSQGIANVRHLISQVAGSDATVLVLGQSGTGKEVVARNIHYISER
RDGPFIPVNCGAIPPELLESELFGHEKGSFTGAISSRKGRFELAEGGTLFLDEIGDMPLQ
MQVKLLRVLQERVFERVGGSKTIKTDVRVVAATHRDLETMISENEFREDLYYRLNVFPIE
MPALSERRDDVPLLLQELVSRVFNEGRGKVRFTQRAIESLKEHTWSGNVRELSNLVERLT
ILFPGGLVDVNDLPNKYRYIDVPEYCVEISEEQLERDALASIFNDDEPIELPDTRFPTEL
PPEGVNLKDLLAELEIDMIRQALELQDNVVARAAEMLGIRRTTLVEKMRKYGMGKE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaattgaacaacgaattttaattgtcggtaccctctccgagcgtgtaactcgc
ctgtgctgcatttttgaattcttaggtgagcaatgtgacattttaaccgttgacgctttg
ttacctttgatagaagaatcaagataccgcgccattgttatagactccgatgtggtaggg
cttgatagtgttaaaaatattgcagcaatagcgccttggcagccactattactattgggc
aataccgctattgaagcgtccagtattcttggtgtaatagaagaaccgattaattatcca
caactaactgaattactgcatttttgtcaggtgttcggtcaagctaaaaaagagcaagct
cctaccagtggtaatcaaactaaattatttcgcagtcttgttggtcgcagtcagggtata
gccaatgtgcgacacttaattagccaagttgcaggttctgatgccacggttttagtgctt
ggccaatctggtacaggcaaagaagtggttgcccgtaatattcattacatatcagaacgt
cgtgacggaccgtttataccggttaactgcggtgcgataccgccagagttactagaaagt
gagttatttggccatgagaaaggctcttttaccggggcaatatcatcacgtaaaggtcgc
tttgagttagctgaaggtggcacgctatttcttgatgaaattggcgatatgccactgcaa
atgcaagtgaaactattgcgtgttctgcaagaacgagtatttgaacgtgttggcggcagt
aaaacaatcaaaacggatgtgcgtgtcgtcgcggcaacgcatcgtgatttagagaccatg
atttctgagaatgaattccgtgaggatttatattatcgcctgaacgtctttccaattgaa
atgcctgcattgtctgaacgtcgtgatgatgtgccattgttattgcaagaattggttagt
cgagtctttaatgaaggccgaggtaaagtgaggtttacccagcgtgctattgagtcatta
aaagagcacacttggtctggaaacgttcgcgaattgtctaatttagtcgagcgattgact
attttatttcctggtggattagttgatgtaaacgatttacctaataaatatcgctatatt
gatgtaccagaatactgtgttgagataagtgaagagcaattagagcgtgatgcattagcg
tctatttttaatgatgatgagcccattgaactccctgacacacgctttcctacagagtta
ccgcctgaaggcgtcaaccttaaagatttattggcagagcttgaaatagatatgatccgt
caggcgttagaattacaagataatgtggttgctagagccgctgaaatgttggggattcgt
cgcactaccctggtagaaaaaatgcgaaaatacggtatgggtaaagaatag
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