Shewanella glacialimarina: FJ709_13410
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Entry
FJ709_13410 CDS
T07885
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FJ709_13410 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgla01007
]
FJ709_13410 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgla03016
]
FJ709_13410 (hisS)
Enzymes [BR:
sgla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
FJ709_13410 (hisS)
Amino acid related enzymes [BR:
sgla01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FJ709_13410 (hisS)
Transfer RNA biogenesis [BR:
sgla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FJ709_13410 (hisS)
Prokaryotic type
FJ709_13410 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
FmdE
Motif
Other DBs
NCBI-ProteinID:
UCX05394
LinkDB
All DBs
Position
complement(3081794..3083068)
Genome browser
AA seq
424 aa
AA seq
DB search
MAKQIQAIRGMNDLLPTQSPVWQKVESIIRSSVSAFGYSEIRTPIVESTELFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFHQFGVEIYGIGSADIDAEVLMLSARLWQQLGIEDHVSLELNTLGDPAERAAYRDA
LIAFLEQHKDVLDEDSKRRMYTNPLRVLDSKDQQVQALLSDAPALMDYLGEDSKTHFSTL
CELLDAVGIQYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVGQLGGKDT
PAVGFAMGLERIVLLLETLELNDDIAPEVDIYVTAMGDNCLVEAIKVAQELRQGLPSLKV
MSHCGGGNFKKQMKRADKSGAQFALIIGENEITNNQVAIKPLRNNNEQQLVTRSELVAKI
AELI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacaaatccaagcaattcgtggtatgaatgatcttctacccacccaaagtcca
gtttggcaaaaagttgagtcgattattcgctcttcagtcagtgcttttggttatagcgaa
attcgaactccaattgtagaaagtaccgaacttttcaaacgttctattggtgaagtcacc
gatattgttgaaaaagagatgtacacctttgaagatcgtaacggtgacagtttaacgctt
cgacctgaaggtactgcatcaacagtgcgtgcaggtaatgaacacggtttactctataac
caagagcaacgcttatggtacatggggcctatgttccgccatgaacgtcctcaaaaaggg
cgttatcgtcaatttcatcagtttggtgttgaaatttacggtattggcagtgccgatatt
gatgcagaagtcttgatgctttcagcgcgattatggcagcagttaggcattgaagatcac
gtgtcattagaattaaataccttaggtgatcccgcagagcgcgccgcttatcgtgatgca
ttaattgcgtttctagaacaacacaaagatgtgcttgatgaagacagcaagcgtcgcatg
tatactaatccactacgggttctcgattctaaagaccagcaagtgcaggctttattgtcc
gatgcgccagcgttaatggattatttgggtgaagactcgaaaacacatttttcaacatta
tgtgaactcttagacgctgtgggcatccaatacaccattaatccgcgtttagtgcgtgga
ttagattactacaaccgtacagtatttgaatgggtaactagcagtttaggctcgcaaggt
actgtattggccggtggtcgttacgacggcttagttggccaattaggtggaaaagatact
ccagcagtgggttttgctatgggattagagcgcattgtattgctgcttgaaaccttagag
cttaatgatgatattgctccagaagttgatatttatgtcacggcaatgggcgataattgt
cttgttgaagccattaaagtcgcgcaagagttgcgtcaggggctaccaagccttaaagtc
atgagtcattgtggcggtggtaattttaaaaagcagatgaagcgtgctgataaaagcggt
gcacaatttgcgttaattattggtgagaatgaaatcaccaataatcaagtggctattaag
ccgttaagaaacaataacgaacaacaattagttacccgcagtgagctggtagctaaaatt
gcagaactgatttag
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