KEGG   Shewanella glacialimarina: FJ709_14145
Entry
FJ709_14145       CDS       T07885                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sgla  Shewanella glacialimarina
Pathway
sgla00740  Riboflavin metabolism
sgla01100  Metabolic pathways
sgla01110  Biosynthesis of secondary metabolites
sgla01240  Biosynthesis of cofactors
sgla02024  Quorum sensing
Module
sgla_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sgla00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    FJ709_14145 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FJ709_14145 (ribD)
Enzymes [BR:sgla01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     FJ709_14145 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     FJ709_14145 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF2520 Ala_racemase_C
Other DBs
NCBI-ProteinID: UCX05521
LinkDB
Position
complement(3235245..3236381)
AA seq 378 aa
MTSFSVFDTQMMGRAIQLARKGLYTTRPNPSVGCVLVQDSIIIGEGYHQVAGQGHAEVNA
LADAAKQGYSTVGATAYVTLEPCSHYGRTPPCALGLINAQVARVVIAVKDANPQVADNGI
AMLQDAGIQVEVGLLAAEALTLNLGFMKRMKTGLPWVTVKVAASLDGKTALSNGVSKWIT
GPAARQDVQRMRARHCALITGVETIIADDPSLNVRYEELGSLKSSLSPTSLQQPLRVVLD
SQARLTADFMLFSIETPILLVSTCGYSNAVQALFPNHVSLLQVKANSAGRVCLDTLLKYL
GESCNSVMIEAGATLSGSFVEHNLVDELVLYQAPKLLGSEGRNMLTLTDYQSMDQIPKIV
LKDQRNVGQDTRFVFGLS
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgactagctttagtgtatttgatacccaaatgatgggtcgtgcgatccagctggcgcga
aaaggtctttatactacgcgccccaatccatctgttggctgcgtacttgtccaagactca
attattattggtgaaggttatcatcaagttgcgggtcaaggacatgcagaggtcaatgca
ttggctgatgccgctaaacaaggatattctaccgttggcgctacagcctatgtgacttta
gagccttgtagtcattatggacgtactccgccctgcgccttagggttaattaatgcccag
gttgctagagtcgttattgcagtgaaagacgctaaccctcaagtagccgataacggtatt
gccatgttgcaagatgcaggtattcaagttgaggttggtttattagccgctgaagctttg
acgttaaacctagggtttatgaagcggatgaaaaccggtttgccatgggttacggtgaaa
gttgccgctagtttagatggcaaaactgccttgtctaatggtgtttctaaatggattacc
ggtcccgcagcaagacaagatgtgcaacgaatgcgtgcccgccattgcgcgttaatcacg
ggcgttgaaactattattgcagatgatcctagcttaaatgtgcgttatgaagaacttggc
agcttgaaaagttctctttcacccacatctctacagcagccattaagagtcgtgttagat
tcccaagcccgattaaccgcagattttatgctattcagtattgaaacaccgattctatta
gtttcaacctgtggctactctaatgctgtacaagcactttttcctaaccatgttagtttg
ctgcaggtaaaagcaaatagtgcagggcgtgtgtgtcttgataccttattgaaatatttg
ggtgaaagttgtaactcagtgatgattgaagcaggggcaacactttcaggcagttttgtt
gaacataatctggtcgatgagcttgttttgtaccaagcaccaaaactgttgggcagtgaa
gggcgcaacatgctgaccttaactgattatcaatcaatggatcaaatacccaaaatagta
ttaaaagatcaacgaaatgtcggccaagacacacgatttgtatttggtttaagctaa

DBGET integrated database retrieval system