Shewanella glacialimarina: FJ709_14315
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Entry
FJ709_14315 CDS
T07885
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgla03000
]
FJ709_14315 (nhaR)
Transcription factors [BR:
sgla03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FJ709_14315 (nhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
UCX05552
LinkDB
All DBs
Position
complement(3271531..3272463)
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AA seq
310 aa
AA seq
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MQHLNYNHLYYFWMVKRKGSVVKAAEALCLAPQTITGQMRLLEGRLKGALFKRVGRNLEA
TELGEVVYRYADKMFNLSNEMLDLLNYQKDSSVLFEVGIADALSKALVSRVLLTVIPHDG
SIHLACYESTHESLIARLREHQLDMILSDCAGGALKYTDILSKKLGECGVSFFCAHPIDA
EFPACLEQEKLLIPGIRTSLGQQLHRWFAEKNLNVSILGEFDDAAMMKAFGYFKRGIFVA
PSIYRHDILSQGMVLLGETTDIKEEYHVMFAERMIQHPAVKSLLETDFTDLFSGLDQQVQ
DFDNRLGLVD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcttaattataatcatctttactatttttggatggttaaacgaaaaggttcg
gttgttaaagctgctgaagcattgtgtttagcgcctcaaacgattactggccaaatgcgt
ttactagagggaaggttgaagggcgcactgtttaagcgagttgggcgcaacctagaggca
acagaactcggtgaagtcgtttatcgttatgccgataaaatgtttaatttaagtaatgaa
atgcttgatttgcttaactatcaaaaagactcctctgtattatttgaagtcggaattgct
gatgctttgtccaaagcgctggtgagcagggtgctattaactgttattccacatgatggt
tcgatacatcttgcgtgttatgagtctacccatgaaagccttatcgctagattacgtgaa
catcagctagatatgatactgtcagattgtgctggcggggcattgaagtacactgatatt
ttatctaaaaaattaggtgaatgtggggtaagctttttttgtgctcatcctattgatgct
gaatttcctgcgtgtttagagcaggaaaagttgctgattcctgggatccgaacatcactt
ggacagcagttgcatcgctggtttgctgaaaaaaaccttaatgtcagtattttaggcgag
tttgatgatgcagctatgatgaaagcatttggatattttaaacgaggtatttttgtcgcc
ccgtctatttatcgtcatgatatactttcgcaaggaatggttttgttaggcgaaaccacc
gacattaaagaagaatatcatgtcatgtttgctgaaaggatgatccaacatccggcagtg
aaaagcttgcttgaaactgattttaccgatttattttcaggattagatcagcaagtacaa
gattttgataatcgcttaggactagtggactaa
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