Shewanella glacialimarina: FJ709_14805
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Entry
FJ709_14805 CDS
T07885
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_14805 (dinB)
Enzymes [BR:
sgla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJ709_14805 (dinB)
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
FJ709_14805 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
Cdd1
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UCX05641
LinkDB
All DBs
Position
complement(3386487..3387560)
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AA seq
357 aa
AA seq
DB search
MRKIIHVDMDCYFAAVEMRDFPELRDKAIAVGGRSDRRGVISTCNYAARKFGVRSAMSSY
QALKLCPHLVLVPGRMQVYKDVSQQIRQIFNRYSDVIEPLSLDEAFLDVSDCQQYHGSAT
LIAQAIRRDIELETGLTASAGVAPIKFLAKIASDLNKPNGQYVITPDEIPEFVRTLPLKK
IPGVGKVTAQKLSVLGLETCADVQLYPKAKLLESFGKFGAVLIERSNGIDPRPISNNRVR
KSVGVETTLAQDIFTLAQCHQVLPQLIQELDSRVSRSAKDRLINKQVVKIKFNDFKQTTI
EQRSDEISVKLFYELLQQALTRSNERGIRLIGVSVGLAETGEKKLQTESVAQLDLQF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaattattcatgttgacatggactgctattttgccgccgttgagatgcgtgat
tttcctgaattgcgcgataaagctattgctgtgggtggacgtagtgatcgccgtggcgtc
atcagtacctgtaactatgctgcacgtaagtttggtgtgcgctcagctatgtcgagctat
caagcgttaaagctgtgccctcatttagtcttggtgccagggcggatgcaggtttataaa
gatgtttcacaacaaataaggcagatatttaaccgctacagtgatgtgattgagccactg
tcattagatgaggccttcctcgatgtcagtgactgtcagcaataccacggcagcgcgacc
ttaattgcccaggctattcgccgagatatcgagttagaaaccggattaacagcatcagcg
ggcgtcgcgccgattaagtttttagccaaaattgcctcagatttaaataaacctaatggt
caatatgtgattacccccgatgaaattcctgaatttgtacgcaccctaccgttaaagaaa
attccgggcgttggcaaagtcacagcgcaaaaattgtcggtattagggttagaaacctgt
gccgatgtgcagctgtatcctaaggcaaagttactggaaagttttggtaagtttggcgca
gtgttaattgaacgatcaaatggcatcgatccaaggcctatcagcaataaccgagtgcgt
aaatctgtgggcgttgaaacaacattagcccaggatatttttaccttagctcaatgccac
caagtattaccgcaacttattcaagagcttgatagtcgggtgagccgcagcgcaaaagat
cgattaatcaataagcaagtggtgaagatcaaattcaacgattttaaacaaaccaccatc
gagcaacgcagcgatgaaatatcggtaaagctgttttatgaattgttacaacaagcactg
accagaagtaatgaacggggtattagattaattggggtgagtgttgggttggcggaaaca
ggtgaaaaaaaactgcaaactgagtcggttgcccaactcgatttacagttttaa
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