Shewanella glacialimarina: FJ709_15480
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Entry
FJ709_15480 CDS
T07885
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sgla03110
]
FJ709_15480 (clpB)
Chaperones and folding catalysts [BR:
sgla03110
]
Heat shock proteins
HSP100
FJ709_15480 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_24
AAA_14
ATPase_2
AAA_18
TniB
nSTAND3
bpMoxR
IstB_IS21
AAA_7
DUF815
NBD_SMAX1
AAA_19
AAA_25
NACHT
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
UCX05760
LinkDB
All DBs
Position
complement(3544376..3546949)
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AA seq
857 aa
AA seq
DB search
MRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDSGSIHPLLTQAGMRVSAL
RSTLSQELERLPQVDGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFILAALEGND
ALAKALKDAGATKELMENTIQQIRGGQKVDDPNAEDQRQALKKYTVDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAATMSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRAI
QLKLEEQALAKETDDASRKRLDHLQVELKDVELKASELNEIWHTEKAALAGTQHIKADLE
QARMDMDVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVL
SKSTGIPVSKMLEGEREKLLHMEDALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGS
FLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDRIQESFGRVTYEEMKQSVMDVVIQNFRPEFLNRVDESVVFHPLDASNIKHIASIQLE
LLRKRLAEKEFDLQVSDEALSLIAEVGFDPVYGARPLKRALQQEVENPLAQKLLRGDLIP
GKVIQANVEQGKLVFVQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagactcgaccgtatgacgaataagtttcaaattgctatttctgatgcgcaatcatta
gcattaggacgggatcatcaatttattgaacctatccatttaatgatggctctacttaat
caagattctggctcaattcatccattactgactcaagctggcatgcgtgtcagcgctcta
cgttcaaccttaagccaagaattagagcgcttaccacaagttgatggaacaggcggtgat
gtacagttgtcacagggccttattcgtctattgaatttatgtgacaagctggctcagaaa
cgcaaagacaaatatatttcatcagaattattcattcttgctgcacttgaaggtaatgac
gcgttagctaaagcgcttaaagatgctggcgctaccaaagagttaatggaaaataccatt
caacaaatccgtggcggtcaaaaagtagatgatcctaatgctgaagatcaacgccaagcg
ttgaaaaagtacaccgtcgacttaactgagcgagcagagcaaggaaagttagaccctgtg
attggtcgtgatgaagaaattcgccgcacgattcaagtattacaacgccgcacgaaaaac
aatccagtattaattggtgagcccggtgtcggtaaaacggctattgttgaagggcttgct
cagcgtattgttaatggtgaagtccctgaaggcatcaaaaataaacgggtgctatcactt
gatatggggtcgttaattgcaggcgctaaatatcgtggcgaatttgaagagcgcttaaaa
gcggtacttaatgaattatcccaagaagaaggccaagtaattctgtttatagatgaatta
catactatggtcggcgcgggtaaaggtgaaggcgcaatggatgctggcaacatgttaaag
cccgcattagcccgtggtgatttacattgtgtgggtgccacaaccttagatgagtatcgt
caatacatagagaaagatgccgcacttgagcgtcgttttcaaaaagtgctggtggacgag
cctagcgtagaagacacgattgccattttacgtggtttgaaagagcgctatgaacttcac
caccatgtagaaattaccgatcccgccattgttgccgcagcaactatgtctcatcgatat
atttcggatcgtaaattacctgataaagccatcgatttaattgatgaagctgcttcaagt
attcgcatgcagattgattctaaacccgaatctttagatagattagagcgccgagctatt
cagttaaagctagaagagcaagcgttagccaaagaaaccgatgatgcaagtcgaaaacgc
ttagatcatttgcaggtcgaactaaaagatgttgaattgaaagcatcagagcttaatgag
atttggcataccgaaaaagccgcattggcaggtactcagcatatcaaagccgatttagaa
caggccagaatggatatggatgttgctcgaagggctggggatttaacccgtatgtctgag
ttacaatatggtcgtattccagagctagagaagcaattagatttagcctctcaagcagag
atgcaagacatgacattgcttaggaataaagtcaccgatgttgaaattgctgaagtgtta
tcaaaatcaaccggaattcctgtgtcaaaaatgcttgaaggtgagcgcgagaaattattg
catatggaagatgcactgcatgagcgagtgattgggcagaatgaagccgttgatgctgtg
tccaatgctattcgtcgaagccgagcgggacttgccgatccccaacgtcccataggttca
ttcttgtttctaggcccgacaggtgttggtaaaacagagttgtgtaaatcgttagctaag
tttttatttgataccgagtcggctttagtgcggatagatatgtcagagtttatggaaaag
cacacggtttctcgcttagtcggtgcccctcctggttatgttggttatgaagaaggaggc
tacttaactgaagctgtgcgtcgcaaaccttattcggtcattttattagatgaagttgag
aaagcccatccagacgtatttaacattttactgcaagtgttagatgacggtcgcttaacc
gatgggcaaggtcgtacagttgattttaaaaatactgtgattattatgacctcgaatcta
ggatccgatcgtattcaagaaagtttcggtcgtgtgacttatgaggaaatgaaacaaagc
gttatggatgtagtgatacagaatttcagacctgagtttttaaatcgggtagatgaatcg
gtagtgtttcatccacttgatgctagcaatattaaacacattgccagcattcagctagaa
cttttacgcaaacgtttagcggaaaaagagtttgatctgcaagtatctgatgaagcgcta
tcgttaattgctgaagtgggttttgatcccgtctatggtgcaaggccattaaagcgagct
ttacagcaagaagtggaaaaccctctagcgcaaaagctgcttcgtggggatttaattccg
ggtaaagtgattcaagcaaatgttgagcagggcaagttggtgtttgtgcagtaa
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